Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04191 ATGATTGGAGGAGGAGCTTTATACGAGAAACTAACAACGATGATGACCTCGGATCACGCTTCCGTGGTGTCACTAAACATATTTGTTGCTCTTCTTTGTACTTGTATCGTCATCGGTCATTTGTTAGAGGAAAACCGTTGGATTAATGAATCCATCACTGCCCTTCTCATTGGTTTGTGTACTGGTGTGTTAATATTGTTTACAACTGGAGGAAGAAGCTCTCATATAATGGTTTTCAGTGAAGATCTTTTCTTTATTTACCTTCTACCACCTATCATTTTCAATGCCGgGTTTCAGGTCAAGAAGAAACAATTTTTCCGCAATTTTATGACTATAATGCTTTTTGGTGCAATTGGTACACTAATATCATTCTGCATCATATCACTAGGTGCTATACACTTCTTCCAAAAATTAGATATTGGTTCCCTCAAGATTGGAGATTATCTagCAATTGGAGCAATATTTTCAGCAACAGATTCAGTTTGCACATTACAGGTTCTTAATCAAGATGAGACACCTTTACTATACAGCTTGGTGTTTGGAGAAGGGGTGGTAAATGATGCTACTTCTGTAGTACTCTTCAAAGCAATTCAGAATTTTGACCTCTCCCACATTGACTTAACCACTGCTTTACACTTACTAGgaaactttttatatttattcatagCAAGCACTGTTTTGGGAATCTTTgttggATTGCTTAGTGCATTCATTATTAAAAAGCTCTATTTTGGCAAGTTGATAAGACACTCTACGGACCGCGAGGTTGCTCTCATGATACTAATGGCTTATCTTTCATATATGCTAGCAGAACTATTTTCTTTAAGTGCCATTCTGACTGTTTTCTTCTGCGGCATTCTTATGTCGCATTACACGTGGCACAATGTAACAGAAAGTTCTCGAGTGACAACAAAGCATACTTTTGCTACTATGTCATTCATTGCTGAGATATTTATCTTCCTTTATGTTGGGATGGATGCACTAGATATAGAGAAGTGGCGATTCGTAAGTCAAAGCCCAAGAAAATCTATTGGGGTCAGTTCATTGTTGTTGGCTCTTATCCTAGTGGGAAGAGCTGCATTTGTttttcctctttccttcatatCCAACTTGTCTAAGAAGTCTCAATCTGAGAAAATTGAGTTTAAGCAACAAGTGACAATTTGGTGGGCAGGTCTCATGCGTGGAGCTGTTTCGATTGCACTTGCTTACAATCAGTTTACCAGGCTAGGACATACTAAATTGGGTGAGAATGCCATCATGATCACTAGTACTATTACGGTTGTACTCTTCAGCACAGTGGTGTTTGGCTTGATGACGAAGCCACTTGTGAGGTTATTGCTTCCTTCATCTAAACACATAATAATCAGCATACCGTCCCCGCCATCGAGTCCGAAATCGTTCAGTGTGCCACTTCTTGGCAATGGAGAGGATGATGTAGGGGGCAATGGTGGGATTCAAAGACCAAGCAGATTGCGTATGCTCCTTAGGATCCCTAGTCATGGGGTACATCACCATTGGCGCAAATTTGATGATTCTTTCATGCGACCCGTCTTTGGTGGCCGGGGTTTTGTACCTTATGTTCCTGGTTCACCCCTTTAA 1602 0.392 MIGGGALYEKLTTMMTSDHASVVSLNIFVALLCTCIVIGHLLEENRWINESITALLIGLCTGVLILFTTGGRSSHIMVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTIMLFGAIGTLISFCIISLGAIHFFQKLDIGSLKIGDYLAIGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFKAIQNFDLSHIDLTTALHLLGNFLYLFIASTVLGIFVGLLSAFIIKKLYFGKLIRHSTDREVALMILMAYLSYMLAELFSLSAILTVFFCGILMSHYTWHNVTESSRVTTKHTFATMSFIAEIFIFLYVGMDALDIEKWRFVSQSPRKSIGVSSLLLALILVGRAAFVFPLSFISNLSKKSQSEKIEFKQQVTIWWAGLMRGAVSIALAYNQFTRLGHTKLGENAIMITSTITVVLFSTVVFGLMTKPLVRLLLPSSKHIIISIPSPPSSPKSFSVPLLGNGEDDVGGNGGIQRPSRLRMLLRIPSHGVHHHWRKFDDSFMRPVFGGRGFVPYVPGSPL 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04191 533 Pfam Sodium/hydrogen exchanger family 27 445 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tsu04g04191 533 Gene3D - 144 196 - -
Tsu04g04191 533 PANTHER SODIUM/HYDROGEN EXCHANGER 3 7 532 - -
Tsu04g04191 533 PANTHER SODIUM/HYDROGEN EXCHANGER 7 532 IPR018422 GO:0006812|GO:0015299|GO:0016021
Tsu04g04191 533 PRINTS Na+/H+ exchanger signature 83 94 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Tsu04g04191 533 PRINTS Na+/H+ exchanger signature 97 111 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Tsu04g04191 533 PRINTS Na+/H+ exchanger signature 152 162 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Tsu04g04191 533 PRINTS Na+/H+ exchanger signature 112 120 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04191 Tsu-Chr4 50234438 50237692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04191 5 532 Antiporters AT3G05030 72.846 0.0 794
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04191 - - ccaj:109808409 897.116
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04191 04 50234438 50237692 Tsu04g04191 04 50234438 50237692 ECH