Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04185 ATGCTTGTTGTTTGTGATGTGCACTGCTCTGCTGAGCAGAAAGTGGTTGATGATGAGATTGATTGGTATGGAATTCTTCAGGTAGAACACACAGCTGGTGATACAATGATTAAGAAGCAGTACCGAAAGTTTGCTCTTCAACTTCATCCCGATAAAAACAAGTTTGCTGGTGCAGAAGCTGCATTTAAGCTGATTGGAGAAGCTCAAAGAGTGCTTTCAGACAGAGAAAAACGAACTAGATATGACATGAAGCTTAGGGCGAAAAAAACTGCTATGCCACATCATAATCCACAGAAGGTTCCTACGAATTTCAATTCTGCAACGAAAAACAATGCCAGGCCCAATTTTACAAACTCGAACACccaacagcagcagcagcaaaaTAAGCAGCCCGCGCAGCAGCAAAATGGTGGGCGCGGTACTTTTTGGACTGCTTGTCCGTTTTGTTCTGTGAAGTATCAGTACTACAGAGAAGTTTTAAATAAACCTCTTCGCTGTCAACATTGCCATAAGCCATTCGTTGCATATATTGTGGATATGCAAGGTACATCACGGACAACTAACTCAAGTCAGCAAGCTTCCAAGGAGAATGTTGGATCACAAGGCAACTCACATGCTGAGAAGTCCAATACAAACTCTTTCAAGAATAAAGTCCCGGTTGGTGTCTCTAGAAAGTCAAATGTGAAGAGAACCTGGAATCAAGTGGAAGAATCCAGTGAATGCTCTGATTCTACAAGCAGCAGTGATTCTGAAGGTGAAAGAGTGGCTGCTAAGTATGGTTTTCCAGGTGTAAGAAGCAATTCAACTGAGCAGCAACGGAGATCTGTGCGACAGAAGCACAAGGTTTCCGACGGTGATAATATGAGCAACAATGACAATGACCTATTAAGACCTTCAAAAAAGGGTCATGAGAATAGGTCAGCTTGTGGTGATAGTCAAAGTCACGGCGAGAAAACTAAAACTCGTGATCAGAATGGTTTAACAGCTGATCCAAAAGATGAACATGAAAAGGTAAAACAGAACCAGGATTTTCATTCTAAAGAGAGCTCACTGGATAGAAATGAGGGAAAAAAGAGGGCGAGTGGAAAAGAAGCTGTGGGAGGGTCAAAGCATATGGATGAAACTTTAGAGAATTCTTCTCCAAATTCAATGTGCAAGACAACAACTCTTCCTAATGCTTATCCCTATTTCAATGCAGAGTTCAGTGATTTTGacaaggacaaaaaaaaagaatgttttgCACCTGGGCAGATTTGGGCTATCTATGATGCAACAGATGGCATGCCTAGATTATATGCTTTGATTAGAAAAGTTTTCCCTCCTGGATTTAAGTTGCAAGCAACATGGCTTGAACCACATCCAGATGACAAAGATGAAATCAAGTGGGTAGATGAGGAATTGCCCGTTGCTTGTGGGAAATTTAAACTTGGTACCACTGATATCTTTGAAGATCATCAGCTGTTTTCTCATCTGGTTCAGTGCGAAAGAATTGGCCGCAATACTTTTCATCTGTATCCTAGAAAGGGAGAAACGTGGGCTCTTCTTAAAAATTGGGATATCAAATGGTACATGAATGCGGAATCTCATAAGCAGTATGAATATGAGTTTGTTGAAATCCTGTCAGATTATGTCAATGGTGAGGGTGTATATGTTGGATACTTGGGTAAATTGAAAGGTTTCGTAAGCCTCTTCTTTCGAATTATGAGAGAAGATAACCAGCCGTTTCAAATTCCATCCCTGGAGTTATTTAGATTCTCTCACATGGTTCCATCTTTCAAAATGACTGGTCAGGAAGGAGTCGGTGTTCATTTAGGATATTTAGAACTTGATCCTGCATCTTTACCAATGGATCTTGAAGAGATTGCTGATCCTCAAAATTTGGATGTGAAGATTGGGCATAGTTCATGTGGCAGTGATAATGCAAgatcttcaaaaatatcaaaacccTTGATGACCCCTGACAAAGTTATATCCACTCCCAAGTTTAATGTTGAAACAAGCAACATGACTGAGATAAAGGATTCTGTTGATGATATCGATGACTGCCATGCTTGTCCAGATTCAACCCCAGAAGCTTATGAAATTCCAGATGCtcagttcttcaattttgaaacTGGGAGATCCCTTGATAAGTTCCAGATTGGTCAAATATGGGCATTTTACAGTGACGAGGATGAAATGCCAAAATACTATGGTCAGATTAAAGAAATTGAGACTAGCCCTGATTTTAAATTGCATGTTTATTGGCTCGCTTGCTGCTGGCTACCAGAGAATACTATTAAATGGGAAGATGAACATATGCTTATTTCATGTGGCAGATTTAAAGTCAttaaaacaaatgattttctctctaCTTACAGTAACTTGTCTTGTATTTCACATCAAGTACAAGCTGATGCTATTGGTAAGAATTATGCCATCTATCCGAGAAAAGGCGAAGTATGGGCTCTTTATAGGAATTGGTCGAACAAAATCAAGTGTTCTGACCTGAAAAATTGGGAGTATGGCATAGTGGAAGTTCTTGAAGAAGCTGAGTTGTTTATAGAGACTTTAGTTTTAGAGCAGGTTAGTGGTTTTAGTTCTGTCTTCAGAGGCAAATCAAATCAAGGTTCTTCCGTCAACCTGAGAATATCCAGAAAAGAATTGCTGAGGTTCTCTCACCAAATTCCAGCTTTCAAACTGACAGAACAGCATGGCGGCAATCTGAGAGTTTTTGCAACATCGAAAGACAAAGGTACCATCGTTGATTCTGGAACAACTTTGGCATACCTTCCAGAAGAGGCTTATGATCCTTTTGTTAATGCGGATAAGATATCTCTTAGTACCGGTGTTGTCAAAGCTGTCATGACTCGGACAGTGTTCGATGAGGATCCAATAATTATATTTGGTATTTCAAAGGTTTTAATACCAAAGGAGATCTTCGGGAAGAAATTTcattctcctcctcctcctcctcctgaTGTTCCTTCTCCTCCAGTGATTGACAGCAAAGATGATGGTGGAGCAGTGTGGTGTATTGGATTTCAGAAGAGCAAAGATCTAGTActcaaagacaaaattgttgTTTATGATCTAGACGGTCAGCGCATTGGATGGGCTCACTATAACTGTTCTTTGCCGATTAATGTCTTTGCAGCAATTGGCCCTAGCATACAAGTGAATACCGGAAAGATAAATGGAAGTTCTTGTCTAGATGATGGACTCATCGCGTCTTTCTTTGTAACCTTGATTTTCTACCTTATGTTTTTgtag 3252 0.3825 MLVVCDVHCSAEQKVVDDEIDWYGILQVEHTAGDTMIKKQYRKFALQLHPDKNKFAGAEAAFKLIGEAQRVLSDREKRTRYDMKLRAKKTAMPHHNPQKVPTNFNSATKNNARPNFTNSNTQQQQQQNKQPAQQQNGGRGTFWTACPFCSVKYQYYREVLNKPLRCQHCHKPFVAYIVDMQGTSRTTNSSQQASKENVGSQGNSHAEKSNTNSFKNKVPVGVSRKSNVKRTWNQVEESSECSDSTSSSDSEGERVAAKYGFPGVRSNSTEQQRRSVRQKHKVSDGDNMSNNDNDLLRPSKKGHENRSACGDSQSHGEKTKTRDQNGLTADPKDEHEKVKQNQDFHSKESSLDRNEGKKRASGKEAVGGSKHMDETLENSSPNSMCKTTTLPNAYPYFNAEFSDFDKDKKKECFAPGQIWAIYDATDGMPRLYALIRKVFPPGFKLQATWLEPHPDDKDEIKWVDEELPVACGKFKLGTTDIFEDHQLFSHLVQCERIGRNTFHLYPRKGETWALLKNWDIKWYMNAESHKQYEYEFVEILSDYVNGEGVYVGYLGKLKGFVSLFFRIMREDNQPFQIPSLELFRFSHMVPSFKMTGQEGVGVHLGYLELDPASLPMDLEEIADPQNLDVKIGHSSCGSDNARSSKISKPLMTPDKVISTPKFNVETSNMTEIKDSVDDIDDCHACPDSTPEAYEIPDAQFFNFETGRSLDKFQIGQIWAFYSDEDEMPKYYGQIKEIETSPDFKLHVYWLACCWLPENTIKWEDEHMLISCGRFKVIKTNDFLSTYSNLSCISHQVQADAIGKNYAIYPRKGEVWALYRNWSNKIKCSDLKNWEYGIVEVLEEAELFIETLVLEQVSGFSSVFRGKSNQGSSVNLRISRKELLRFSHQIPAFKLTEQHGGNLRVFATSKDKGTIVDSGTTLAYLPEEAYDPFVNADKISLSTGVVKAVMTRTVFDEDPIIIFGISKVLIPKEIFGKKFHSPPPPPPDVPSPPVIDSKDDGGAVWCIGFQKSKDLVLKDKIVVYDLDGQRIGWAHYNCSLPINVFAAIGPSIQVNTGKINGSSCLDDGLIASFFVTLIFYLMFL 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04185 1083 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 906 - -
Tsu04g04185 1083 PANTHER - 1 906 - -
Tsu04g04185 1083 Pfam DnaJ domain 21 82 IPR001623 -
Tsu04g04185 1083 Gene3D Acid Proteases 891 1047 IPR021109 -
Tsu04g04185 1083 SUPERFAMILY Chaperone J-domain 17 85 IPR036869 -
Tsu04g04185 1083 Pfam Domain of unknown function (DUF3444) 691 897 IPR024593 -
Tsu04g04185 1083 Pfam Domain of unknown function (DUF3444) 396 598 IPR024593 -
Tsu04g04185 1083 MobiDBLite consensus disorder prediction 272 287 - -
Tsu04g04185 1083 MobiDBLite consensus disorder prediction 185 252 - -
Tsu04g04185 1083 PRINTS DnaJ domain signature 23 41 IPR001623 -
Tsu04g04185 1083 PRINTS DnaJ domain signature 41 56 IPR001623 -
Tsu04g04185 1083 PRINTS DnaJ domain signature 57 77 IPR001623 -
Tsu04g04185 1083 MobiDBLite consensus disorder prediction 96 138 - -
Tsu04g04185 1083 SMART dnaj_3 20 77 IPR001623 -
Tsu04g04185 1083 MobiDBLite consensus disorder prediction 185 384 - -
Tsu04g04185 1083 Gene3D DnaJ domain 19 138 IPR036869 -
Tsu04g04185 1083 MobiDBLite consensus disorder prediction 296 371 - -
Tsu04g04185 1083 CDD DnaJ 21 74 IPR001623 -
Tsu04g04185 1083 MobiDBLite consensus disorder prediction 88 138 - -
Tsu04g04185 1083 SUPERFAMILY Acid proteases 901 1038 IPR021109 -
Tsu04g04185 1083 ProSiteProfiles dnaJ domain profile. 21 85 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04185 Tsu-Chr4 50182120 50191001 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04185 1 178 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 27.778 2.12e-19 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04185 - - mtr:MTR_4g118660 1395.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04185 04 50182120 50191001 Tsu04g04185 04 50182120 50191001 ECH