Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04065 ATGGGATATCAAAAGCCTGCATGGTTGGAAGCTCTTTATAGAGAAAAGTTCTTTGTTGGTTGTTCTTACCATGAGAATGCAAAAAAGAATGAGAAGAATGTTTGTTGTTTAGATTGTTGCACAAGTATTTGTCCTCATTGTTTACCGTCTCATCGCTATCACCGCCTTCTTCAAGTTCGTCGATATGTTTATCATGATGTTGTTAGATTGGAAGATCTTGAGAAACTAATTGATTGCACCAATGTTCAGGCCTATACTATCAATAGTGCTAAAGTGGTGTTCATCAAGAAGAGACCTCAAAACCGGCAATTCAAAGGATCAGGAAACTATTGCACATCATGTGATAGAAGCCTTCAAGAACCTTTTATCCATTGTTCTCTTGGATGCAAgGTGGATTTTGTGATGAAACACTACAAGGATCTTTCACCCTTCTTAAGGACATGCCACACCCTACAATTAAGTCCTGACTATCTCATTCCACAAGAAATGGGGGATGAATTAGAGATGACAAGATCAACAATTGTGGATTGTGATGAAGCAATGAGTTCATATTCAGGATCATCATCAGGGTCAGAAAATATGAGCATGATGGCATGCACAGAAATTGTTAGGAAAAGAAGAAGTGGATGGACAAGTATGTGTGCAAAATTCATggccaataataataatagcaatAAAGTTTCAGATGAAGAAATGGCTACAATTTTGATTAGTAGAAGAAAAGGAATCCCTCATAGATCTCCTCTATGTTAG 753 0.3639 MGYQKPAWLEALYREKFFVGCSYHENAKKNEKNVCCLDCCTSICPHCLPSHRYHRLLQVRRYVYHDVVRLEDLEKLIDCTNVQAYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEPFIHCSLGCKVDFVMKHYKDLSPFLRTCHTLQLSPDYLIPQEMGDELEMTRSTIVDCDEAMSSYSGSSSGSENMSMMACTEIVRKRRSGWTSMCAKFMANNNNSNKVSDEEMATILISRRKGIPHRSPLC 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04065 250 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 250 - -
Tsu04g04065 250 Pfam PLATZ transcription factor 60 131 IPR006734 -
Tsu04g04065 250 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04065 Tsu-Chr4 49232242 49233952 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Tsu04g04065 PLATZ 8.1e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04065 - - gmx:100785737 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04065 04 49232242 49233952 Tsu04g04065 04 49232242 49233952 ECH