Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04055 ATGTTGAAAGTGAAGGGAGGAACAAGACCACCATGGGTAGGACTTGGAGCTGCAGTATGGGTTCAAATAGCAGTAGGAAATTCTTACACATTCCCACTTTACTCACCTTCTTTCAAATCTGTTCTTGGTTTCAATCAAACTCAAGTTACTCTTCTTGGTGTTGCTAATGATATTGGTGAAAATGTTGGTCTTCTTCCTGGTATTGTTTGTAACAAGTTCCCTCCTTGGCTTATGCTTTTCATTGGTGCTCTTTTCTCTTTCCTTGGTTTTGGTCTTCTTTGGCTCTCTGTCTCTAAAACACTTCCTTCTCTTCCTTATCCTCTGCTATGGTTTGCACTTGCTATTGCTACCAACAGTTGTGCATGGTTAACCACTGCCATTCTTGTGACCAACATGAGAAATTTCCCGGTCAGTAGAGGCACAGTTGCTGGAATATTGAAAGGTTATGGAGGGATCAGTGCTGCAGTTTTCACAGAAATTTACAGGGCACTTCTTCATAATTCTTCTTCTAATTTCCTCTTGTTTCTCGCTGTCGGCATTCCTGCTTTGTGCTTCACTGTCATGTTTCTTATTCGTCCTTGTACACCGGTTTCTGGTGAGAATTCCTCAGAAAAATGGCATTTTGTTTTCATTCAATGTTCAAGTGTGGCTTTAGGTGTATATTTACTTGTAACAACAACACTTGATTACATTCTTCACATAAATTCCACCGTGTCTTATGCTTTGGTGGCTTTGATGATTCTTCTTCTCATGGCTCCTCTTGCTATCCCTTTAAAGATGACATTGTTTCCTCAAAAAGTAACTGAATCAGAAGAAAATGTGCAAAGTGAAGGCAAAGAAGAAAACACAAAGCCCCTTTTACAATCTTCGTCGGCTAATGCACTTGGTAGTTTCTCGGATGCTGGTGGTTTATCTGAGGTTGATTTACTTCTTGCTGAGGGTGAAGGAGCAGTAGTACCTTCAAAAAAGAGAAGGCCGAGAAGAGGGGAAGATTTTACGTTTACTGAGGCATTGGTTAAGGCTGATTTCTGGCTGTTATTTTTTGTATACTTTGTTGGTGTTGGAACTGGTGTTACTGTTATTAATAATCTGGCTCAAGTAGGTGCTGCTCAAGGTGTGGAAGATATCACCATCTTACTCTCAGTTTTCAgctttttcaattttgttggcCGACTTGGTGGAGGAGTTGTTTCTGAACACTTTGTCAGGACGAAAACGATCCCGCGAACGGTTTGGATGACATGCACACAAATAGTTATGATAATTGTGTACCTACTGTTAGCACATGCCATCAAAGGAACACTTTATCCAGCAGTTGGATTTCTTGGCATCTGCTATGGAGTTCAATTTTCCATACTGATTCCAACAGTTTCAGAGCTTTTTGGTTTGAAGCACTTTGGATTATTTTTCAACTTCATGTCATTAGGTAATCCACTTGGTGCATTACTTTTCTCGGCTCTTCTAGCAGGGCGTATATATGACAATGAATTGGCAAGGCAACAAGGTTTTGGTCTCATTGCTGCAAGTGTTTCGTGCGTTGGTCCTGATTGTTTTAAGGTCACCTTTTTGGTACTTGCTGCTGTTTGTGTTGCTGGTACAATCTCAAGCATTATCTTGACTATAAGAATTAAGCCCGTTTATCAAATGCTTTATGCTGGTGGTTCTTTTAGGTTACCTCAAATGTCATGCCAATAA 1695 0.3988 MLKVKGGTRPPWVGLGAAVWVQIAVGNSYTFPLYSPSFKSVLGFNQTQVTLLGVANDIGENVGLLPGIVCNKFPPWLMLFIGALFSFLGFGLLWLSVSKTLPSLPYPLLWFALAIATNSCAWLTTAILVTNMRNFPVSRGTVAGILKGYGGISAAVFTEIYRALLHNSSSNFLLFLAVGIPALCFTVMFLIRPCTPVSGENSSEKWHFVFIQCSSVALGVYLLVTTTLDYILHINSTVSYALVALMILLLMAPLAIPLKMTLFPQKVTESEENVQSEGKEENTKPLLQSSSANALGSFSDAGGLSEVDLLLAEGEGAVVPSKKRRPRRGEDFTFTEALVKADFWLLFFVYFVGVGTGVTVINNLAQVGAAQGVEDITILLSVFSFFNFVGRLGGGVVSEHFVRTKTIPRTVWMTCTQIVMIIVYLLLAHAIKGTLYPAVGFLGICYGVQFSILIPTVSELFGLKHFGLFFNFMSLGNPLGALLFSALLAGRIYDNELARQQGFGLIAASVSCVGPDCFKVTFLVLAAVCVAGTISSIILTIRIKPVYQMLYAGGSFRLPQMSCQ 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04055 564 Gene3D MFS general substrate transporter like domains 339 547 IPR036259 -
Tsu04g04055 564 PANTHER NODULIN-LIKE/MFS TRANSPORTER 2 563 - -
Tsu04g04055 564 CDD MFS_Mch1p_like 10 533 - -
Tsu04g04055 564 Pfam Nodulin-like 11 258 IPR010658 -
Tsu04g04055 564 Gene3D MFS general substrate transporter like domains 12 203 IPR036259 -
Tsu04g04055 564 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 563 - -
Tsu04g04055 564 SUPERFAMILY MFS general substrate transporter 231 545 IPR036259 -
Tsu04g04055 564 SUPERFAMILY MFS general substrate transporter 14 195 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04055 Tsu-Chr4 49145493 49149174 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04055 2 560 Nodulin-like Gene Family AT1G80530 58.688 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04055 - - mtr:MTR_4g116210 957.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04055 04 49145493 49149174 Tsu04g04055 04 49145493 49149174 ECH