Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04029 ATGATACCTTTCATTTCTTGTTTAACACTCTTCGAGCACCATTCCCTCAGGATGATTGAACCTGATGAGTATATTGTGACTATGCCATCTGACAGTGAAACCGCCGACGAGGTAAATTTGTTGCCGTCTCCTGAAATACCAATTGGAATTGATATTGGCACATGGCCATGTTGTGTTGCGGTGTGGAATGGTTCCGATTTTGATCTTTTTAGCAACGAAACAAATAAGGACATTATGAAATCAGGTGAAACTTTCAAATATGATAGCTCTTCTATTGGAGTTATTAGTACTAGTGAAGTCTCACTCTCCCAAGACCAAGTGCATGACATTTCGTATGAAGCTACAATTTACAACATGAGACGCTTGATTGGCAGAATTGATACAGATCCAGTAGTTCATGCAAGTAAAAATTTCCCATTTAGGGTGCAGACTTTGGACATTGGCGTTCGCCCTTTAATTTCAGAAAAAATGAACAATGCTTGGAGATATACCACTGTAGAACAAGTCCTTGCGGTATTTCTGGGTCAACTAAGTGTATTGGCTGAAACTCAACTGAAACAGCCTGTAAGAAATGTAGTGTTTACGGTTCCAGTCTCATTCAATCGATTCCAGCTAAATAGGATATACTATGCTTGTACGATGGCCGGTCTTGGTGTTCTCAAGCTGATGCCTCAACCAACAGCAGTGGCTTTGTTGTATGCACGACAACAACTGCAGgctgcttcttcttctcatGAGGACATGAACAGTGAAAGCAACAAAATTGCTCTCATTTTCAATATGGATTCTGGTTATTGTGATGTTGCTGTGACTGTTGCTACAGGAAGAAAATGCCAAATGAAAGCCTTGGTAGGAAGTGCTATTGGTGGCGAAGATTTGCTTGGAAATCTGATGAATCATCTCTTACCAGATTCTGAAAATAAATTCAAGAAACATCTAGATGGGGACAAAGAAATTAAATCAATGAGTATACTTCGAGCAGCAACACTGAAAGCGATTCACCGACTTTCCTCTCAGACAAGTGTTGAATTTGATTTAGACTTGGGAGATGGTTTGAAGATATGCAAGGTTGTGAAGCGGGAGGAGTTTGAGAAGATAAACAATGAGGTGTTTGAAAAGTGTGAAAGGCTAATCAAACAGTGCTTGCAAGATGCAAATGTAGAAGTTGAGGATATAAATGATGTGATAATTGTTGGTGAATGTTATCATATACCAAGGGTGAAGAATCTTGTTACTAAAATATGTAAAGTAACACAACTTTATAAAGGTATGAATCCTTTAACAGCTTCTGTTTGTGGTGCAGCAGTGGCAGGAGCTATTGCTCCAGACATTCATGACACCTCTGGGAACTTGGACTTGTTAACTTCTCACGTCACACCTCTTACAGTTGGAATTCGAGCTAATGGAAACAACCTTGTCCCTGTAATTCCGAGGAACACAACAGTGCCAACAATTAGCGTTATAGATTTCACTACTATTCATGATAATCAAACCGAGGCATTGGTCCTAGTCTACGAAGGTGAGGCACAGAAAGCAGAAGAAAACCACCTTTTGGGATATTTGAAAATAATGGGAATACCTGCAGCACCAAAAGGAGTTCCAGAAATCAATGTGGGCATGGGCATAGACTGTGAAAACGAGCTGACAGTTCGAGCTGATGTTTACATGCCTGGATCACAGCAACCTGTAATTCCTGCTATTGAAGCTAGGATGCCAATGGCAGAGATCGATGATGGGCATTTTTGGCATGCTGAGGCACTAAATAGAACCTATGGTGACAAAATGGATCTGGTTACTCTCCTCAAGAATGAATAA 1815 0.3994 MIPFISCLTLFEHHSLRMIEPDEYIVTMPSDSETADEVNLLPSPEIPIGIDIGTWPCCVAVWNGSDFDLFSNETNKDIMKSGETFKYDSSSIGVISTSEVSLSQDQVHDISYEATIYNMRRLIGRIDTDPVVHASKNFPFRVQTLDIGVRPLISEKMNNAWRYTTVEQVLAVFLGQLSVLAETQLKQPVRNVVFTVPVSFNRFQLNRIYYACTMAGLGVLKLMPQPTAVALLYARQQLQAASSSHEDMNSESNKIALIFNMDSGYCDVAVTVATGRKCQMKALVGSAIGGEDLLGNLMNHLLPDSENKFKKHLDGDKEIKSMSILRAATLKAIHRLSSQTSVEFDLDLGDGLKICKVVKREEFEKINNEVFEKCERLIKQCLQDANVEVEDINDVIIVGECYHIPRVKNLVTKICKVTQLYKGMNPLTASVCGAAVAGAIAPDIHDTSGNLDLLTSHVTPLTVGIRANGNNLVPVIPRNTTVPTISVIDFTTIHDNQTEALVLVYEGEAQKAEENHLLGYLKIMGIPAAPKGVPEINVGMGIDCENELTVRADVYMPGSQQPVIPAIEARMPMAEIDDGHFWHAEALNRTYGDKMDLVTLLKNE 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04029 604 Pfam Hsp70 protein 48 563 IPR013126 GO:0005524|GO:0140662
Tsu04g04029 604 PANTHER HEAT SHOCK PROTEIN 70KDA 25 603 IPR013126 GO:0005524|GO:0140662
Tsu04g04029 604 SUPERFAMILY Actin-like ATPase domain 47 234 IPR043129 -
Tsu04g04029 604 CDD HSP70_NBD 48 439 - -
Tsu04g04029 604 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 458 561 IPR029047 -
Tsu04g04029 604 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 446 579 IPR029047 -
Tsu04g04029 604 Gene3D - 117 172 - -
Tsu04g04029 604 Gene3D Actin; Chain A, domain 4 290 373 - -
Tsu04g04029 604 Gene3D - 249 421 - -
Tsu04g04029 604 SUPERFAMILY Actin-like ATPase domain 253 440 IPR043129 -
Tsu04g04029 604 Gene3D - 48 438 - -
Tsu04g04029 604 PRINTS 70kDa heat shock protein signature 46 59 - -
Tsu04g04029 604 PRINTS 70kDa heat shock protein signature 424 444 - -
Tsu04g04029 604 PRINTS 70kDa heat shock protein signature 192 212 - -
Tsu04g04029 604 PRINTS 70kDa heat shock protein signature 452 471 - -
Tsu04g04029 604 PRINTS 70kDa heat shock protein signature 392 408 - -
Tsu04g04029 604 PRINTS 70kDa heat shock protein signature 533 549 - -
Tsu04g04029 604 PANTHER HEAT SHOCK 70 KDA PROTEIN 8 25 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04029 Tsu-Chr4 48962278 48964666 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04029 48 603 Calmodulin-binding Proteins AT3G12580 32.394 8.44e-81 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04029 K09489 - gmx:100809773 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04029 04 48962278 48964666 Tsu04g04029 04 48962278 48964666 ECH