Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04027 ATGGCTTTTCCACTTATTGTAAGAAATCCTACTTTCTACACATCTCCATCCCACACTCACCAATTCACCGCCTCCTCTTCCTTCAGAACCAAATCTCTTTCCCTCCTCAATTTCGCAAAGATGGAAGGAAGTGAAATCACTGAACAAGTTGCAGGGAAAGTAGTGGAagatgatgattttcttttgaaGAAGAAAGTTTTTGTTGCTGGTGCTACTGGTAGCACTGGGAAAAGAATCGTTGAACAGTTACTTGCAAAAGGTTTTGCTGTTAAGGCTGGTGTTAGAGATTTGGACAAGGCTAGGACTTCATTTTCATCTACCAATCCATCTCTTCAATTTGTTAAAGTTGATGTCACGGAGGGTTCTGATAAGCTAGCTGAAGCCATTGGCGATGATACAGAAGCAGTAGTATGTGCCACAGGCTTTCGGCCAGGGTGGGATTTGCTTGCTCCGTGGAAGGTTGACAATTTTGGCACCGTAAACCTTGTTGAAGCATGCAGGAAAGTCAACGTAAACAGATTCATTCTTATAAGCTCCATTTTAGTCAATGGGGCAGCTATGGGACAGCTACTCAATCCAGCATACATCTTTCTCAACGTTTTCGGACTCACATTAGTAGCAAAGTTACAGGCAGAAAATCATATCAGGAAATCTGGTATAAATTACACAATAATAAGACCTGGAGGGTTGAAAAACGATCCTCCTGCCGGAAATATTGTTATGGAGCCAGAGGACACCCTTTATGAAGGTTCCATATCCAGAGATCAAGTTGCAGAGGTAGCTGTGGAATCATTGGCTTATCCTGAGTCATCTTATAAAGTTGTGGAGATAGTTGCTCGACCTGATGCTCCTAAACGCGCATACCATGATCTTTTTGGTTCCATAGTTCAACGATGA 897 0.4169 MAFPLIVRNPTFYTSPSHTHQFTASSSFRTKSLSLLNFAKMEGSEITEQVAGKVVEDDDFLLKKKVFVAGATGSTGKRIVEQLLAKGFAVKAGVRDLDKARTSFSSTNPSLQFVKVDVTEGSDKLAEAIGDDTEAVVCATGFRPGWDLLAPWKVDNFGTVNLVEACRKVNVNRFILISSILVNGAAMGQLLNPAYIFLNVFGLTLVAKLQAENHIRKSGINYTIIRPGGLKNDPPAGNIVMEPEDTLYEGSISRDQVAEVAVESLAYPESSYKVVEIVARPDAPKRAYHDLFGSIVQR 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04027 298 PANTHER FLAVIN REDUCTASE-RELATED 41 297 - -
Tsu04g04027 298 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 63 278 IPR036291 -
Tsu04g04027 298 CDD SDR_a5 65 280 - -
Tsu04g04027 298 Pfam NAD(P)H-binding 70 266 IPR016040 -
Tsu04g04027 298 Gene3D - 48 287 - -
Tsu04g04027 298 PANTHER - 41 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04027 Tsu-Chr4 48938601 48941817 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04027 63 195 Monolignol Biosynthesis Gene Families AT2G33590 31.690 2.70e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04027 - - lja:Lj4g3v0258680.1 486.878