Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04014 ATGGACAGTGAAAACAACAAAATTGCTCTCATTTTCAATATGGATTCTGGTTATTGTGATATTGCTGTGACTGTTGCTACAGGAAGAAAATGCCAAATGAAAGCCTTGGCAGGAAGTGCTATTGGTGGCGAAGATTTGCTTGGAAATCTGATGAATCATCTCTTACCAGATTCTGAAAATAAATTCAAGAAACATCTAGATGGGGACAAAGAAATTAAATCAATGAGTATACTTCGAGCAGCAACACTGAAAGCGATTCACCGACTTTCCTCTCAGACAAGTGTTGAATTTGATTTAGACTTGGGAGATGGTTTGAAGATATGCAAGGTTGTGAAGCGGGAGGAGTTTGAGAAGATAAACAATGAGGTGTTTGAAAAGTACGTGAAAGGCTAA 393 0.3817 MDSENNKIALIFNMDSGYCDIAVTVATGRKCQMKALAGSAIGGEDLLGNLMNHLLPDSENKFKKHLDGDKEIKSMSILRAATLKAIHRLSSQTSVEFDLDLGDGLKICKVVKREEFEKINNEVFEKYVKG 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04014 130 Gene3D Actin; Chain A, domain 4 43 126 - -
Tsu04g04014 130 PANTHER HEAT SHOCK 70 KDA PROTEIN 8 1 128 - -
Tsu04g04014 130 Gene3D - 4 128 - -
Tsu04g04014 130 Pfam Hsp70 protein 4 128 IPR013126 GO:0005524|GO:0140662
Tsu04g04014 130 SUPERFAMILY Actin-like ATPase domain 6 128 IPR043129 -
Tsu04g04014 130 PANTHER HEAT SHOCK PROTEIN 70KDA 1 128 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04014 Tsu-Chr4 48822255 48822647 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04014 7 126 Calmodulin-binding Proteins AT1G56410 33.333 1.94e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04014 K09489 - gmx:100809773 161.77