Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03999 ATGGCAACACAATCTGATGAGCATCCAAAGAAAGCTTTCGGTTGGGCAGCAAAAGATTCTTCTGGTCTTCTCTCCCCATTCAATTTCTTTAGAAGAGAAACGGATGAAAAAGATGTGGCACTTAAAATATTGTATTGTGGGATATGTCACTCAGATCTCCACATGATAAAGAACGAATGGGGCATATCTACATATCCACTAGTACCAGGACATGAAATTGTTGGTATAGTGACAAAGGTGGGAAGCAAAGTAGAAAAGTTCAAAGTTGGAGACAAAGTAGGTGTTGGCTACATGATTGACTCGTGTCGAACATGTCAAAACTGTACCGAAAATCTTGAAAGTTATTGTCCGCAGTATATACCCACATGTGGTGCCAAGAACTATCGCGATGGCACCACATATGGAGGTTACTCTGACTCAATCGTTGTAGACGAGCACTTTGTGATTCTTATTCCTGATAGTTTACCACTTGAAGTTGCGGCTCCTCTTCTTTGCGCCGGTATCACAGTGTATAGTCCTCTTCGATATTTTGGGCTCGACAAGCCCGGTCTACATATAGGTGTTGTTGGTCTTGGTGGACTTGGTCACATGGCTGTTAAATTTGCCAAAGCTTTTGGTGCTAATGTGACTGTAATTAGTACATCACCTAACAAAGAAAAGGAAGCAATAGAACACTTAGGAGCTGACTcattttttataagtcatgacaaagataaaatgaaggCTGCAATGGGTAGTTTGGATGGTATCATTGATACAGTTTCAGCTGATCATTCAATCTCATCTCTTATTGGTTTGTTGAAGTCTCATGGAAAACTTGTAATGGTCGGTGTTCCAATGAAGCCTGTCGAGATCCACGTCTCTCATTTACTTTTGGGGAGAAAGATGGTAACTGGAAGTAATATCGGAGGAATGAAAGAAACTCAAGAGATGATTGATTTTGCTGCAAAACACGATGTAAAACCTACCATTGAAATCATTCCTATGGAATATGTTAACATTGCGATGGAGCGACTCCTCAAAGCAGATGTTAAATATCGATTTGTGATTGATATTGGAAACACTCTCAAACCAAGCTCCCAACTCTAG 1089 0.3939 MATQSDEHPKKAFGWAAKDSSGLLSPFNFFRRETDEKDVALKILYCGICHSDLHMIKNEWGISTYPLVPGHEIVGIVTKVGSKVEKFKVGDKVGVGYMIDSCRTCQNCTENLESYCPQYIPTCGAKNYRDGTTYGGYSDSIVVDEHFVILIPDSLPLEVAAPLLCAGITVYSPLRYFGLDKPGLHIGVVGLGGLGHMAVKFAKAFGANVTVISTSPNKEKEAIEHLGADSFFISHDKDKMKAAMGSLDGIIDTVSADHSISSLIGLLKSHGKLVMVGVPMKPVEIHVSHLLLGRKMVTGSNIGGMKETQEMIDFAAKHDVKPTIEIIPMEYVNIAMERLLKADVKYRFVIDIGNTLKPSSQL 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03999 362 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 321 IPR036291 -
Tsu04g03999 362 CDD CAD1 13 351 - -
Tsu04g03999 362 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 4 359 - -
Tsu04g03999 362 SUPERFAMILY GroES-like 8 198 IPR011032 -
Tsu04g03999 362 Gene3D - 15 352 - -
Tsu04g03999 362 PANTHER ALDEHYDE REDUCTASE 4 359 - -
Tsu04g03999 362 Pfam Zinc-binding dehydrogenase 193 316 IPR013149 -
Tsu04g03999 362 SMART PKS_ER_names_mod 22 350 IPR020843 GO:0016491
Tsu04g03999 362 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Tsu04g03999 362 Gene3D - 166 322 - -
Tsu04g03999 362 Pfam Alcohol dehydrogenase GroES-like domain 37 149 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03999 Tsu-Chr4 48692287 48694946 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03999 10 362 Monolignol Biosynthesis Gene Families AT4G37990 67.422 7.85e-163 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03999 - K23232 gmx:100816901 564.303