Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03970 ATGAATATTCAACATCATCATATAAGAATAATGgctatatcatcatcatcattaccaACCAATAATAATAGCTTGTTCTCAGTCTCAGCAAGGCCACACCTTTTGgttacttcttcttcttctcttccttttATTTCCAAAACTGTCATCCATTTCCATAATTATTCACTTCATAATAAGCTTCACCTTCGGCGGCGGCTTAATTCTGTTAGAAAATTGAGTGGAGTTCCCGCGCCAACGATAGCCATGACAACAACAGAGGTGCAAGAAGTTCTTCCACCACCTCTTACTTCAACTTCACCCCCACCTTCCTTATTTGATGGAACTACCagGTTGTATATCTCCTACAAATGTCCCTATGCTCAACGTGTATGGATCGCCCGAAACTCTAAGGGATTGCAGGAGAAGATAGAGTTGGTTCCCATTGATCTACAAGACAGGCCTTCCTGGTATAAGGACAAAGTCTACCCGCCCAACAAGGTTCCATCTCTGGAACACAACAATGAAGTTAAAGGAGAGAGTCTTGATCTGATTAAATATATTGACACTCACTTTGAAGGCCCCTCACTTTTCCCTAATGGTACCGATGATAAGGAGTTTGCTGAAGAGTTGCTATCTTACACGGATACATTCTACAAGACCGCTACTTCTTCGTTTAAAGGAGGAGATGTGACCGACGCTGGCACTGCATTTGATTACCTTGAGACTGCTCTCTCCAAATATGATAATGGACCTTTCTTCCTTGGCCTATTCAGTCTGGTGGATATAGCATATGCTCCTTTCATAGAAAGATTTCAACCGTTTTTAATGGATGTGAAAAATTATGACATTACAATAGGCAGACCTAAACTGGCAGCATGGATTGAGGGAATAAACAACATTGAAGGCTACAAAATAACCCGTTCTGATCCCAAGGAGCTCGTTGAAAGTTACAAGAAGCGCTTCCTGGCCAATCCATGA 960 0.3958 MNIQHHHIRIMAISSSSLPTNNNSLFSVSARPHLLVTSSSSLPFISKTVIHFHNYSLHNKLHLRRRLNSVRKLSGVPAPTIAMTTTEVQEVLPPPLTSTSPPPSLFDGTTRLYISYKCPYAQRVWIARNSKGLQEKIELVPIDLQDRPSWYKDKVYPPNKVPSLEHNNEVKGESLDLIKYIDTHFEGPSLFPNGTDDKEFAEELLSYTDTFYKTATSSFKGGDVTDAGTAFDYLETALSKYDNGPFFLGLFSLVDIAYAPFIERFQPFLMDVKNYDITIGRPKLAAWIEGINNIEGYKITRSDPKELVESYKKRFLANP 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03970 319 Gene3D Glutaredoxin 83 186 - -
Tsu04g03970 319 PANTHER GLUTATHIONE S-TRANSFERASE L1 43 316 IPR044629 GO:0004364
Tsu04g03970 319 CDD GST_C_Lambda 198 312 - -
Tsu04g03970 319 Gene3D - 187 318 - -
Tsu04g03970 319 SUPERFAMILY Thioredoxin-like 102 190 IPR036249 -
Tsu04g03970 319 SUPERFAMILY GST C-terminal domain-like 185 315 IPR036282 -
Tsu04g03970 319 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 108 189 IPR004045 -
Tsu04g03970 319 Pfam Glutathione S-transferase, C-terminal domain 227 289 - -
Tsu04g03970 319 PANTHER GLUTATHIONE S-TRANSFERASE L2, CHLOROPLASTIC 43 316 - -
Tsu04g03970 319 Pfam Glutathione S-transferase, N-terminal domain 112 188 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03970 Tsu-Chr4 48382484 48385297 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03970 94 317 Glutathione S-transferase Gene Family AT3G55040 66.518 1.05e-108 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03970 K00799 - ming:122093307 361.688