Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03951 ATGCTAATCGCTCACTTTGTGAAAGGGATAGTTTCTTTATTAGAGTTTCTGTTCTTTGTTTTCTGTTCGAGATTGCGTTCTGTTTTAGGTCTGATGCAGGCAGAACCTGCGACTGCTTTGTGTTTGATACGGGCTGGTGCTTTGCAGAATGCTATCGCGGCTGAGCCTGGTGCAGCGCAGACATATTTGGCTACTGTTAATCGGGAAACTCTAACTCCAGGGCGATtcaaatACAGAGTTGGGATTGGAATATGCATCCAAGACGAACTTGGTCAATTTGTGCTTTCAAAGACGGAATGGATTTTCCTTCTTTGTGCAGTGGATGTTGGTGAACTTCTTGGTGAGTATATGCCCCTCAAAGTCCCTAAATTGATgAATGTTGGTGAACTTCTTGAAGGGTATTATAAGGCACTTGAAGCTATTGGAAATCCTTCAGCTTTTTATACTTGGGTTTTGGTTTCGGGTGTGTTTTATCATCTATATAACCAATCATCTTATAAAGCATTGGATGAAATTAGTCCATTAACTTTCTCTGTTGGAAACACAATGAATAGAATGGTGGTGATTGTGTCTTCAGTTTTGGTGTTTAGGAATCAGGTTCGACCTCTTAACAGTCTTGCTTCTGCCATTGCTGTTTTTGGGACTTTTCTGTATTCACAAGCTACAGCtgcaaagaaatcaaagaaaattgaaGATGAATTGGCTTTGTAG 711 0.391 MLIAHFVKGIVSLLEFLFFVFCSRLRSVLGLMQAEPATALCLIRAGALQNAIAAEPGAAQTYLATVNRETLTPGRFKYRVGIGICIQDELGQFVLSKTEWIFLLCAVDVGELLGEYMPLKVPKLMNVGELLEGYYKALEAIGNPSAFYTWVLVSGVFYHLYNQSSYKALDEISPLTFSVGNTMNRMVVIVSSVLVFRNQVRPLNSLASAIAVFGTFLYSQATAAKKSKKIEDELAL 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03951 236 PANTHER SOLUTE CARRIER FAMILY 35 131 231 - -
Tsu04g03951 236 PANTHER XYLULOSE 5-PHOSPHATE/PHOSPHATE TRANSLOCATOR, CHLOROPLASTIC 131 231 - -
Tsu04g03951 236 Pfam Triose-phosphate Transporter family 143 219 IPR004853 -
Tsu04g03951 236 SUPERFAMILY Multidrug resistance efflux transporter EmrE 143 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03951 Tsu-Chr4 48216323 48219416 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03951 129 231 Antiporters AT5G17630 75.728 2.00e-48 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03951 K15283 - gmx:100779531 172.94