Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03926 ATGGCGGCTTTCTTAAGAAAACTCGCAAGCTCCACTCCGATCGCATTCGCCGCCCAATCCAAATCCTCCCGTACTCATTTCCACCTACCCTTCACCGCTATCGCTGCCATTTCCGGCGGATTCTCATATCTCTACTACTCTTCATCTCCCAATCTCGTTCACTCAGATCAAATCGCTCAAGAGGATCTTAAACCTCAAAATATCGctCTGGTTCCTGATAAATGGGTTGAATTTAAGCTGCAAGATACTGCCAGAGTCAGTCAAAATACCAACTTATACAgGTTTTCGTTTGATCCCACTAAGAAGTTGGGTTTGGATGTTGCTTCTTGCATTCTTACAAGGGCTCCATTGGGACAAGATGCTGACGAAAAACCAAAATATGTCATACGTCCGTATACCCCTATATCAGATCCAGAATCCAAGGGATATTTTGATTTGCTAATCAAGGTGTATCCTGAAGGAAAAATGAGCCAGCATTTTGCAAGCTTAAAACCAGGTGACGTGGTTGAAGTGAAAGGGCCCATTGAAAAGTTCAGATATACTCCTAATATGAAGAAGAGCATTGGCATGATTGCTGGCGGCTCAGGAATTACTCCTATGCTTCAAGTAATTGAAGCTATACTGAAGAATTCCGATGACAAAACTCAGATATCATTGATTTATGCTAATATCTCCCCAGATGACATACTGCTTCAACAGAAGCTTGATATTCTAGCAGCAAGCCACCCAAACTTAAAGATATTCTACACCGTAGACAATCCAACAAAAAATTGGAAAGGAGGTGTAGGTTACATATCAAAGGATATGGTTGTGAAAGGCTTACCTGCTCCTAGTGATGATACTCTTGTACTTGTTTGTGGTCCCCCTGGGATGATGACACATATATCTGGTGAAAAGGCCAAGGACTGGACACAAGGAGAGGTATCTGGCATACTCAAAGAAGCTGGGTACACTGAACAAATGGTTTACaaattttga 978 0.4182 MAAFLRKLASSTPIAFAAQSKSSRTHFHLPFTAIAAISGGFSYLYYSSSPNLVHSDQIAQEDLKPQNIALVPDKWVEFKLQDTARVSQNTNLYRFSFDPTKKLGLDVASCILTRAPLGQDADEKPKYVIRPYTPISDPESKGYFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKFRYTPNMKKSIGMIAGGSGITPMLQVIEAILKNSDDKTQISLIYANISPDDILLQQKLDILAASHPNLKIFYTVDNPTKNWKGGVGYISKDMVVKGLPAPSDDTLVLVCGPPGMMTHISGEKAKDWTQGEVSGILKEAGYTEQMVYKF 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03926 325 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 167 323 IPR039261 -
Tsu04g03926 325 Gene3D - 172 325 IPR039261 -
Tsu04g03926 325 Gene3D Translation factors 68 171 - -
Tsu04g03926 325 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 73 181 IPR017927 GO:0016491
Tsu04g03926 325 PANTHER NADH-CYTOCHROME B5 REDUCTASE 25 325 IPR001834 GO:0016491
Tsu04g03926 325 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 130 137 IPR001709 GO:0016491
Tsu04g03926 325 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 189 208 IPR001709 GO:0016491
Tsu04g03926 325 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 227 238 IPR001709 GO:0016491
Tsu04g03926 325 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 282 290 IPR001709 GO:0016491
Tsu04g03926 325 Pfam Oxidoreductase NAD-binding domain 190 295 IPR001433 GO:0016491
Tsu04g03926 325 PANTHER NADH-CYTOCHROME B5 REDUCTASE-LIKE 25 325 - -
Tsu04g03926 325 SUPERFAMILY Riboflavin synthase domain-like 67 183 IPR017938 -
Tsu04g03926 325 PRINTS Cytochrome B5 reductase signature 130 137 - -
Tsu04g03926 325 PRINTS Cytochrome B5 reductase signature 166 180 - -
Tsu04g03926 325 PRINTS Cytochrome B5 reductase signature 189 208 - -
Tsu04g03926 325 PRINTS Cytochrome B5 reductase signature 227 238 - -
Tsu04g03926 325 PRINTS Cytochrome B5 reductase signature 282 290 - -
Tsu04g03926 325 CDD cyt_b5_reduct_like 78 325 - -
Tsu04g03926 325 Pfam Oxidoreductase FAD-binding domain 78 180 IPR008333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03926 Tsu-Chr4 48051321 48056950 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03926 64 325 NADPH P450 reductases AT5G17770 40.530 6.00e-65 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03926 K00326 - gmx:100781191 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03926 04 48051321 48056950 Tsu04g03926 04 48051321 48056950 ECH