Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03917 ATGGATTTGAACACCCCAATACGATCCAACACCACGCCCCTCTCCAACTCAGTCTTCAAATCTAAACTTattttcttACATGAATGGTGGCTCATGAAGCCTCAAAACCAGTGCAAGGGCTTAGCTCTTGCTGGGATTGCTTCAATGGAGAGAGAAAGAATGTTTTTTTCCTCTGTGATTGTAAAGAGACATGAACCCAATGTTGTAGAGACTGAAGACGGCATAACAATAATCTTCCGTGGTTTTATTAACTCCTCTCGTACATCTCAAAATGGATTTCCCTCCGACGTATGTCGCCGGTTTGCAGTTGGATTTCCACACAATTGGAAAAATTATTCAGCTCATAGTTCAGGAAATGAATGCCAATATGTGGATAAAGTTGCCAGTTTTGATGACTCAAATGCTTCTTCCCACAAAAAAACAGCTGATGAGGCTTCAAAGGAAGTTATGGAAGCTGAAGTTAACGGAAATATTGTGAGTATTAGGTTGCCTCAACCGCAGGTTGGCATTGttgataatggtgaaaatgTAGTCTCAGATGTTAACGACTTACATGCTTCTCCCCACCTAAAAAAAGCTGATGTGACTTCCCATGAAGCTATGGAAGCTACTGCGAGTCTTAGGTTGTCCCAACCGCTGGTTGACGTGGTTTATAATGGTGACAATAGAGTCTCAGATGTTGACGACTTAAATGCTTCTTTCCACCAAAAGACAGCTGATGTGACTTCACAGGAAGCTATGGAAGCTGAAGATAACAACAATATCGGGAGTCTTAGGTTATCTCAACCGCAGGTTGATTTGATTAATAATGGTGAAAATGAAGTCTCAATTGCTGCTGCAGCTGAAAGTAGACAATCTTTGATGAGTGTGTTTGAATTTGATCCTATCCATGAACAAAGCAATGTTAGGTCTCCACTTTACCCAAAGAAATTGGAATTTGAACATTTATCAAGTGACCGCAAGGAGAAAAAACATATCAAGAAGAAGATTGTAGAGGATACGAGTAGTTTGTGTAGAAGGGTGCTGACAAGAAGCATTGCCAAAAAAAGTCAAATGATGCTTAAAAGGGATGAGAAAGCTGAAGTAAAATGTTATAGTTGTCCTGTTAGAAGATCTCCCAGGatatatataggTGTAGTTGGCATAGGATTTGGGGTCCTTTGGAATTTTCAAATTGGTGCATCAGGAAGCATATTCTGTAAGTTTTAG 1209 0.3921 MDLNTPIRSNTTPLSNSVFKSKLIFLHEWWLMKPQNQCKGLALAGIASMERERMFFSSVIVKRHEPNVVETEDGITIIFRGFINSSRTSQNGFPSDVCRRFAVGFPHNWKNYSAHSSGNECQYVDKVASFDDSNASSHKKTADEASKEVMEAEVNGNIVSIRLPQPQVGIVDNGENVVSDVNDLHASPHLKKADVTSHEAMEATASLRLSQPLVDVVYNGDNRVSDVDDLNASFHQKTADVTSQEAMEAEDNNNIGSLRLSQPQVDLINNGENEVSIAAAAESRQSLMSVFEFDPIHEQSNVRSPLYPKKLEFEHLSSDRKEKKHIKKKIVEDTSSLCRRVLTRSIAKKSQMMLKRDEKAEVKCYSCPVRRSPRIYIGVVGIGFGVLWNFQIGASGSIFCKF 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03917 402 Pfam SANTA (SANT Associated) 24 112 IPR015216 -
Tsu04g03917 402 PANTHER TRANSCRIPTION REGULATOR OTHERS FAMILY-RELATED 204 376 - -
Tsu04g03917 402 PANTHER TRANSCRIPTION REGULATOR OTHERS FAMILY-RELATED 9 227 - -
Tsu04g03917 402 PANTHER MIS18-BINDING PROTEIN 1 204 376 IPR039110 -
Tsu04g03917 402 PANTHER MIS18-BINDING PROTEIN 1 9 227 IPR039110 -
Tsu04g03917 402 Coils Coil 135 155 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tsu04g03917 SANTA 3e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03917 - - mtr:MTR_5g040080 442.195