Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03914 ATGTTGCCAAGGATTTGCATGAAGAAGCCTCATGTTCTTGAATACGAAGACACGACGGCATGGTTCACAGAGCTTGAGAGGCACCATATGGGGGAATTCTCTACGGCTGCTTATCAAGCAAACTCTGTCATGGAAGATTACAGTCAAGTTGAAGTGGGTCACGACAGTCTTTTCGTCGGAATATATGATGGACATAATGGTACAAACACATCAAAGTTCATATCAAATTACATTTTTCAGGAACTATCAAGGCTGATTCGTGAAAACAACGATGTAATGCTTAACAAGCTTCTTCGTGAAGCCGTGGCTGCAACTGAACTGAAGTTCACCCAAGTTGTAATTGACAATAAAATAACTAATCCAGACATAATGTATATGGGTTCTTGCTGTCTAATCACTCTTATATGGAAGGGGACGCTATATATAGCCAACCTTGGCGATTCTCGAGTTGTGCTTGGCACGATTCCACCAGTAACACCACCAATTCCAAGAGTCTTAAAAGCCGCCCAGTTAACAATGAATCTCAGTTGTGAGGGTCGTTATAATAGAATAGCATTGGAACAACAATTTCCAGGTGATCCTACTGTTCTCTTGAAGGATGAAAATGGATGGAAGGTTAAAGGCCTATCCAAGGTTACCGGTACTATTGGGGATGTCTATATAAAAACAAGTCTCACCTATTCGCCAAAGTTCAAAAATTTGTCTCAGCCAATTTCTGTTCTATCATCATTACCAATTATATGTTCAAGCATCTTAAGATATTATGATAAATTCTTTATCGTTGCATCACGTGGATTTTGGGAAATCATGACAATACACGAGGCAGCTTCAATTGTTGGAAAATATTCTCGACGTGGCATTGCAAAAACACTTTTAAGGAAGGCATTGGAAAAGGTAGCAGCAAGAGTGAAAATGAGTTATAAAGACATTGTAACTTCTTCTGATAGAAAGAAGTATCATGATGATATGACAATAATAGTAGTTTTTGTAGATATAGATAATAATGATAACCCTCTGTGGAAGGGAAATGTACCAAAACTCTCATACAAAGCCCCCTCCCATACTTAG 1068 0.3867 MLPRICMKKPHVLEYEDTTAWFTELERHHMGEFSTAAYQANSVMEDYSQVEVGHDSLFVGIYDGHNGTNTSKFISNYIFQELSRLIRENNDVMLNKLLREAVAATELKFTQVVIDNKITNPDIMYMGSCCLITLIWKGTLYIANLGDSRVVLGTIPPVTPPIPRVLKAAQLTMNLSCEGRYNRIALEQQFPGDPTVLLKDENGWKVKGLSKVTGTIGDVYIKTSLTYSPKFKNLSQPISVLSSLPIICSSILRYYDKFFIVASRGFWEIMTIHEAASIVGKYSRRGIAKTLLRKALEKVAARVKMSYKDIVTSSDRKKYHDDMTIIVVFVDIDNNDNPLWKGNVPKLSYKAPSHT 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03914 355 SMART PP2C_4 25 328 IPR001932 -
Tsu04g03914 355 Gene3D - 10 337 IPR036457 -
Tsu04g03914 355 CDD PP2Cc 39 330 IPR001932 -
Tsu04g03914 355 ProSiteProfiles PPM-type phosphatase domain profile. 29 330 IPR001932 -
Tsu04g03914 355 Pfam Protein phosphatase 2C 203 298 IPR001932 -
Tsu04g03914 355 Pfam Protein phosphatase 2C 55 153 IPR001932 -
Tsu04g03914 355 PANTHER ALPHABET, ISOFORM E-RELATED 16 335 - -
Tsu04g03914 355 SUPERFAMILY PP2C-like 28 331 IPR036457 -
Tsu04g03914 355 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 16 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03914 Tsu-Chr4 47985189 47986651 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03914 21 355 PP2C-type Phosphatase Gene Family AT5G06750 40.698 3.03e-79 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03914 K01102 - gmx:100806476 236.498