Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03913 ATGTTGCCAAGGATTTGCATGAAGAAGCCTCATGTTCTTGAAAACGAAGACACGACGGCATGGTTCACAGAGCTTGAGAGGTACCATATGGGGGAATTCTCTACGGCTGCTTATCAAGCAAACTCTGTCATGGAAGATTACAGTCAAGTTGAAGTGGGTGACAACAGTCTTTTTGTCGGAATATATGATGGACATAATGGCACAAACGCACCAAAGTTCATATCAAATTACATCTTTCAGGAATTATCAAGGCTGATTCGTGAAAACAACAATATGATGAATGGTCAGCTTCTTCGTGAAGCCGTGGCTGCAACTGAACTGAAGTTCACCCAAGTTGTAATCGACAATAAAATAACTAATCCAGACATAATGCATACGGGTTCTTGCTGTCTAATCACTCTTATATGGAAGGGGACGCTATATGTAGCCAGCCTTGGCGATTCTCGAGTTCTGCATGGCTGGATTCCACCAGTAACACCACCAAGAGTGTTACAAGCCGACCACTTAACACTAGATCACAGTTGTGAGCGTCGTTATAATAGAAGAACATTGGAACAACAATTTCCAGATGATCCTACTCTTCTCTTGAAGGATGAAAATGGATGGAAGGTTAAAGGCTTATCCAAGGTTACCGGTACTATTGGAGATGTCTATGTAAAAACAAGTCTCACCTATTCGTCAAAGTTCAAAAATTTGTCTCAGCCAATTTCTGTTCCAATTTCTGTTCTATCATCGGTACCAAATATATATTCAAGCATCTTaacatattttgataaattctttATCGTTGCATCTCGTGGATTTTGGGAAATCATGACAAAACACGAGGCAGCTTCAATTGTTGGAAAATATTCTCGACGTGGCATTGCAAAAACACTTTTAAGGAAGGCGTTGGAAAAGGTAGCAGCAAGAGTGAAAATGAGTTATAAAGACATTGTAACTTCTTCTGATAGAAAGAAGTATCATGATGATATGacaataatagtaattttttcagATTTAGATGATTATGACAAGCCTCTATGGAAGGGAAATGTACCAAAACTCTCGTACAAATCCCCTCCCATACATAGAGAGCTGGGTTTTCACAATTGA 1095 0.3845 MLPRICMKKPHVLENEDTTAWFTELERYHMGEFSTAAYQANSVMEDYSQVEVGDNSLFVGIYDGHNGTNAPKFISNYIFQELSRLIRENNNMMNGQLLREAVAATELKFTQVVIDNKITNPDIMHTGSCCLITLIWKGTLYVASLGDSRVLHGWIPPVTPPRVLQADHLTLDHSCERRYNRRTLEQQFPDDPTLLLKDENGWKVKGLSKVTGTIGDVYVKTSLTYSSKFKNLSQPISVPISVLSSVPNIYSSILTYFDKFFIVASRGFWEIMTKHEAASIVGKYSRRGIAKTLLRKALEKVAARVKMSYKDIVTSSDRKKYHDDMTIIVIFSDLDDYDKPLWKGNVPKLSYKSPPIHRELGFHN 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03913 364 CDD PP2Cc 39 331 IPR001932 -
Tsu04g03913 364 Gene3D - 9 337 IPR036457 -
Tsu04g03913 364 PANTHER ALPHABET, ISOFORM E-RELATED 16 338 - -
Tsu04g03913 364 SUPERFAMILY PP2C-like 27 331 IPR036457 -
Tsu04g03913 364 SMART PP2C_4 30 330 IPR001932 -
Tsu04g03913 364 Pfam Protein phosphatase 2C 54 300 IPR001932 -
Tsu04g03913 364 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 16 338 - -
Tsu04g03913 364 ProSiteProfiles PPM-type phosphatase domain profile. 29 332 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03913 Tsu-Chr4 47976978 47978392 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03913 21 352 PP2C-type Phosphatase Gene Family AT5G06750 39.941 4.47e-76 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03913 K01102 - gmx:100806476 243.817