Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03911 ATGGATTTCAAAAACTTTTGTGGGATTCTGGATTGGATTAACATTGATCGAATTTCACCTAACGAAAGCGCCTTGCTCAACACAAGATCGCTGCAGACAACAAAAGGTGGACATTCTTTACCATTCCTTGAACACCAACAAGTCATCCGCAACAACAGTTCTGTCAACTATTGTTTCAAAATGTTGCCAAGGATTTGCATGAAGAAGCCTCGTGTTCTTGAAAACGAAGACACTACGGCATGGTTCACAGAGCTTGAGAGGCACCATATGGGGGAATTCTCTATGGCTGCATATCAAGCAAACTCTGTCATGGAAGATTACAGTCAAGTTGAAGTGAGTGACAACAGTCTTTTTGTCGGAATATATGATGGACACAACGGCACAAGTGCAGCAAAGTTTATCAAATTACATTTTTCAGGAACTATCAAgtga 432 0.4028 MDFKNFCGILDWINIDRISPNESALLNTRSLQTTKGGHSLPFLEHQQVIRNNSSVNYCFKMLPRICMKKPRVLENEDTTAWFTELERHHMGEFSMAAYQANSVMEDYSQVEVSDNSLFVGIYDGHNGTSAAKFIKLHFSGTIK 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03911 143 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 56 139 - -
Tsu04g03911 143 SUPERFAMILY PP2C-like 82 142 IPR036457 -
Tsu04g03911 143 Gene3D - 67 143 IPR036457 -
Tsu04g03911 143 PANTHER ALPHABET, ISOFORM E-RELATED 56 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03911 Tsu-Chr4 47961529 47963176 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03911 81 138 PP2C-type Phosphatase Gene Family AT5G06750 53.448 2.54e-17 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03911 K01102 - psom:113323434 79.3369