Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03908 ATGTTGCCAAGGATTTGCATGAAGAAGCCTCGTGTTCTTGAAAACGAAGACACGACGGCATGGTTCACAGAGCTTGAGAGGTACCATATGGGGGAATTCTCCATGGCTGCTTATCAAGCAAACTCTGTCATGGAAGATTACAGTCAAGTTGAAGTGGGTGACAACAGTCTTTTTGTCGGAATATATGATGGACATAATGGCACAAACGCAGCAAAGTTCATATCAAATTACATCTTTCAGGAATTATCAAGGCTGATTCGTGAAAACAACAATATGATGAATGGTCAGCTTCTTCGTGAAGCCGTGGCTGCAACTGAACAGAAGTTCACCCAAGTTGTAATTGACAATAAAATAACTAATCCAGACATAATGCATACGGGCTCTTGCTGTCTAATCACTCTTATATGGAAGGGGACGCTATATGTAGCCAGCCTTGGCGATTCTCTAGTTCTGCGTGGCAGGATTCTACCAGAAACACCACCAAGAGTGTTACAAGCCGTCCACTTAACACTAAATCACAGTTGTGAGGATGGTTATAATAGAAGAACATTGGAACAACAATTTCCAGATGATCCTACTCTTCTCTTGAAGGATGAAAATGGATGGAAGGTTAAAGGCTTATCCAAGGTTACCGGTACTATTGGGGATGTCTATATAAAAACAAGTCTCACCTATTCGCCAAAGTTCATAAATTTGTCTCAGCCAATTTCTGTTCTATCATCAGTACCAAATATATATTCAAGCATCTTAccatattttgataaattctttATCGTTGCATCTCGTGGATTTTGGGAAATCATGACAAAACACGAGGCAGCTTCAATTGTTGGAAAATATTCTCGACGTGGCATTGCAAAAACACTTTTAAGGAAGGCGTTGGAAAAGGTAGCAGCAAGAGTGAAAATGAGTTATAAAGATATTGTAACTTCTTCTGATAGAAAGAAGTATCATGATGATATGACAATAATAGTAGTTTTTTCAGATTTAGATGATTATGACAAGCCTCTATGGAAGGGAAATGTACCAAAACTCTCATACAAATCCCCCTCCCATACATAG 1062 0.3861 MLPRICMKKPRVLENEDTTAWFTELERYHMGEFSMAAYQANSVMEDYSQVEVGDNSLFVGIYDGHNGTNAAKFISNYIFQELSRLIRENNNMMNGQLLREAVAATEQKFTQVVIDNKITNPDIMHTGSCCLITLIWKGTLYVASLGDSLVLRGRILPETPPRVLQAVHLTLNHSCEDGYNRRTLEQQFPDDPTLLLKDENGWKVKGLSKVTGTIGDVYIKTSLTYSPKFINLSQPISVLSSVPNIYSSILPYFDKFFIVASRGFWEIMTKHEAASIVGKYSRRGIAKTLLRKALEKVAARVKMSYKDIVTSSDRKKYHDDMTIIVVFSDLDDYDKPLWKGNVPKLSYKSPSHT 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03908 353 Gene3D - 9 333 IPR036457 -
Tsu04g03908 353 PANTHER ALPHABET, ISOFORM E-RELATED 16 334 - -
Tsu04g03908 353 SUPERFAMILY PP2C-like 22 327 IPR036457 -
Tsu04g03908 353 Pfam Protein phosphatase 2C 54 296 IPR001932 -
Tsu04g03908 353 CDD PP2Cc 39 327 IPR001932 -
Tsu04g03908 353 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 16 334 - -
Tsu04g03908 353 SMART PP2C_4 26 326 IPR001932 -
Tsu04g03908 353 ProSiteProfiles PPM-type phosphatase domain profile. 29 328 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03908 Tsu-Chr4 47945147 47946533 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03908 21 353 PP2C-type Phosphatase Gene Family AT5G06750 39.003 4.11e-77 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03908 K01102 - gmx:100806476 242.662