LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu04g03892	ATGACAACCATCACCACACCTTACAGAGATGAACCAGATTACGACAGCAGCTCCTCCTCCATCACCGTACCGGAATCAACCCGAAGCTGGATGAGCAACCTCAGCTTCGGAAGCCGTCGTCGTCGAAGCTCCGTTTCCATTTCTTCTACgaccacatacacctcttcactTTTAGGTTCCAACGCTAAACCTCACAAAGCAAACCAAGTTGCATGGGAAGCCATGAGTAGACTCCGACTCGACAAAGGTCGAGTCGGACTCGACCATTTCCGAATCTTAAAAAGACTCGGAAGCGGTGACATAGGTAATGTATACCTTTGTCAGATAAGAAACCCTGTGGTAGGTTTACCACAGTGTTTTTATGCTATGAAAGTTATTGATAGAGAAGCACTTGCTATAAGGAAAAAGCTTCAAAGAGCAGAGATGGAGAAAGAGATTTTGGGTATGCTTGATCATCCTTTTTTGCCTACTTTGTACACTGAGTTTGATGCTTCTCATTACTCTTGTTTGGTTATGGAGTTTTGTCCTGGTGGTGATTTGTATGCTTCTCGCCAACGCCAACCTGGGAAGCGCTTTTCCTTATCATCCACTAAATTTTATGCAGCTGAGACACTATTGGCAATAGAATATCTACACATGATGGGAATAGTATATAGAGATTTAAAGCCAGAGAATGTTTTAGTAAGAGAAGATGGACACATAATGCTTTCAGATTTTGATCTTTCACTTAAATGTGATGTAGTTCCAAAGCTCttaagaaacaaaacaagatTAGAAAGAAGCATCAAAACTACAACAAGAAAATCTTCAACAGCTTCTTGTATTTCCCCTATGCAACCAGTTTTGTCTTGTTTcttatcatcatcaatcaagaaaaagaaaacaacacttGAAACAGTTATAAGAGAAAATGTTCAAGAAGAGTTTGAGGTTGATCTTGATCCTGATTTTGTAGCTGAACCAATTGATGCAAGATCAAAATCATTTGTAGGGACACATGAATATTTAGCACCAGAAGTTATTTTAGGACAAGGTCATGGAAGTGCTGTAGATTGGTGGACATTTGGTGtttttttgtatgaaatgtTATATGGAAGAACACCATTTAAAGGTGAAAACAATGAGAAAACATTGGTCAACATTTTGAAACAACCTTTGACTTTTCCTAGAATTGGTGTTAGTAGTAGTAATGAGTTTGAAGAAATGGTGAAAGTTCAAGATCTTATTAGTAAATTGTTGGTGAAGAATCCTAATAAGAGAATTGGAAGTTGTTTGGGTTCTGTTGAGATTAAAAGACATGAATTTTTTAAAGGTGTGAATTGGGCTTTGATTAGATCTGTTAGACCCCCTGAGGTTCCTAGTGATAAGAATAAGATTAGGAATAGGGTTTTGGTACCTAAGTTAAGCAAGAAAGAAAGAGATCAACCATTTCAGCTTAAACGTCAGTTCGATTACTTCTGA	1461	0.3607	MTTITTPYRDEPDYDSSSSSITVPESTRSWMSNLSFGSRRRRSSVSISSTTTYTSSLLGSNAKPHKANQVAWEAMSRLRLDKGRVGLDHFRILKRLGSGDIGNVYLCQIRNPVVGLPQCFYAMKVIDREALAIRKKLQRAEMEKEILGMLDHPFLPTLYTEFDASHYSCLVMEFCPGGDLYASRQRQPGKRFSLSSTKFYAAETLLAIEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRNKTRLERSIKTTTRKSSTASCISPMQPVLSCFLSSSIKKKKTTLETVIRENVQEEFEVDLDPDFVAEPIDARSKSFVGTHEYLAPEVILGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNEKTLVNILKQPLTFPRIGVSSSNEFEEMVKVQDLISKLLVKNPNKRIGSCLGSVEIKRHEFFKGVNWALIRSVRPPEVPSDKNKIRNRVLVPKLSKKERDQPFQLKRQFDYF	486

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Tsu04g03892	486	PANTHER	FLIPPASE KINASE 1-RELATED	7	486	-	-
Tsu04g03892	486	Gene3D	Transferase(Phosphotransferase) domain 1	323	454	-	-
Tsu04g03892	486	Pfam	Protein kinase domain	326	436	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Tsu04g03892	486	Pfam	Protein kinase domain	91	245	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Tsu04g03892	486	SMART	serkin_6	90	436	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Tsu04g03892	486	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	216	228	IPR008271	GO:0004672\|GO:0006468
Tsu04g03892	486	MobiDBLite	consensus disorder prediction	1	23	-	-
Tsu04g03892	486	Gene3D	Phosphorylase Kinase; domain 1	88	174	-	-
Tsu04g03892	486	Gene3D	Transferase(Phosphotransferase) domain 1	175	244	-	-
Tsu04g03892	486	CDD	STKc_phototropin_like	88	453	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Tsu04g03892	Tsu-Chr4	47844831	47846564	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tsu04g03892	1	486	AGC Kinase Gene Family	AT2G26700	59.032	0.0	592

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Tsu04g03892		Pkinase	7e-31	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tsu04g03892	K08286		-	gmx:100777988	763.451

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tsu04g03892	04	47844831	47846564	Tsu04g03892	04	47844831	47846564	ECH

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