Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03884 ATGGAGCTAGAACTCTTGTCTTGGCTTAAActtgtttctttctctttcatatTTCTTCTCTTTATTCTCAAACTCACAGTGTTACTTTGGTGGAGACCAAGAAAAATTGAAGACTATTTCTCTAAACAAGGAATTAGAGGACCCCCTTATCGTTTCTTCATTGGAAATGTTAAAGAACTTGTTAGTATGATGTTGAAAGCTTCCTCTCAACCCATGCCTAATTTCTCTCACAACATTCTTCCTAGAGTCCTTTCTTTCTACCATCACTGGAAGAAAATTTATGgtGGAACATTCCTAGTTTGGTTTGGACCCACGGTTCGTCTTACAGTGTCTGATCCAGACCTTATAAGGGAAATCTTCACATCCAAGTCAGAAttttatgagaaaaatgaaGCCCCCCCACTTGTGAAGCAGCTAGAAGGTGATGGGCTCCTTAGCCTTAAAGGAGAAAAATGGGCTCACCACCGTAGAATTATCTCTCCCACTTTTCACATGGAAAATctcaaattgctGATACCGGTGATGGCAACAAGCGTGGTAGAGATGTTGGAAAAGTGGTCGGCAATGAGTGACAAAGGTGAGGTGGAAATCGAAGTTTCTGAGTGCTTTCAAACCCTAACCGAAGATGTTATTACTAAGACCGCGTTTGGAAGCAGCTATCAAGATGGAAAAGCCATTTTCCACTTACAAACTCAACAAATGGTCTTAGCTGCTGATGCCTTTCAAAAAGTTTTCATTCCCGGTTacagattctTTCCCACAAAGAAGAATATAAAATCTTGGAAACTGGacaaacaaataaagaaatCATTGGTGAAGCtaatagaaagaagaaaaaagaattcaTCAACAAATAATGAGAGATTATCATTAATTGATGAAAAAAGTCCAAAAGATTTACTTGGACTAATGATACAAGCTAGTTCAAACAACAACAATGTGACAGTGGATGATATTGTGGAAGAGTGCAAAAGCTTTTTCTTTGCAGGCAAACAAACCACATCAAACTTGCTGACGTGGACGACCATTCTATTAGCAATGCACCCACATTGGCAGGTAAAGGCACGTGATGAAGTTATCAAGATGTGTGGGTCACGTGACCTTCCTACTAAAGATCATGTTGTAAAGCTTAAGACGCTGAACATGATTGTTAACGAGTCACTAAGATTGTACCCACCAACAATCGCAACAATCCGACGGGCAAAAACAGACGTGGAATTAGGAGGCTATAAAATACCACGTGGAACAGAGCTATTAATTCCAATCCTAGCCGTTCATCACGATCTAGCTATATGGGGTAACGATGTAAACGAATTCAATCCTGGCCGTTTCTCTGAAGGAGTAGCACGCGCCGCGAAACATCCAGTGGCATTCATACCTTTTGGCCTCGGTGTACGCACATGTATAGGACAAAACCTCGCAGTGCTACAAACAAAACTGGCCCTTGCAATCATACTGCAGCGTTTTAGTTTCAGGTTGGCCCCTAGTTATCAACATGCACCAACGGTCCTGATGCTACTTTATCCTCAGTATGGTGCACCAATCATATTCAACCAATTGTCCACGTTGGATAATCCGAATCAAGACTCCTCCTCATAG 1599 0.3921 MELELLSWLKLVSFSFIFLLFILKLTVLLWWRPRKIEDYFSKQGIRGPPYRFFIGNVKELVSMMLKASSQPMPNFSHNILPRVLSFYHHWKKIYGGTFLVWFGPTVRLTVSDPDLIREIFTSKSEFYEKNEAPPLVKQLEGDGLLSLKGEKWAHHRRIISPTFHMENLKLLIPVMATSVVEMLEKWSAMSDKGEVEIEVSECFQTLTEDVITKTAFGSSYQDGKAIFHLQTQQMVLAADAFQKVFIPGYRFFPTKKNIKSWKLDKQIKKSLVKLIERRKKNSSTNNERLSLIDEKSPKDLLGLMIQASSNNNNVTVDDIVEECKSFFFAGKQTTSNLLTWTTILLAMHPHWQVKARDEVIKMCGSRDLPTKDHVVKLKTLNMIVNESLRLYPPTIATIRRAKTDVELGGYKIPRGTELLIPILAVHHDLAIWGNDVNEFNPGRFSEGVARAAKHPVAFIPFGLGVRTCIGQNLAVLQTKLALAIILQRFSFRLAPSYQHAPTVLMLLYPQYGAPIIFNQLSTLDNPNQDSSS 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03884 532 Gene3D Cytochrome P450 29 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03884 532 Pfam Cytochrome P450 84 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03884 532 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03884 532 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03884 532 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03884 532 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03884 532 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03884 532 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03884 532 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03884 532 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03884 532 PRINTS P450 superfamily signature 468 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03884 532 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03884 532 PANTHER CYTOCHROMEA2 6 515 - -
Tsu04g03884 532 PANTHER CYTOCHROME P450 FAMILY MEMBER 6 515 - -
Tsu04g03884 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Tsu04g03884 532 SUPERFAMILY Cytochrome P450 39 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03884 Tsu-Chr4 47777274 47782296 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03884 1 525 Cytochrome P450 AT2G26710 75.947 0.0 828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03884 K15639 - gmx:100780027 893.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03884 04 47777274 47782296 Tsu04g03884 04 47777274 47782296 ECH