Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03845 atgagttGGAGTAGGGTGTTGAAATCTGCTCAGGCACTTGCTGctcatatttttctattatgtttCACTCTTTTGCTTCTTCTCAAGCTTGatcatcaaatttcttcatcttGGTGGATAATATTTTTACCTCTTTGGATGTTCCATGGCGTTGTGGCTCGAGGAAGGTTTTCATTACCTGCGCCATCAGCTCCACGTAATCGACATTGGGCGCCGTGTCACGCTGTTGTTGCGATGCCATTGCTCATTGCGTTTGAATTGCTCCTTTGCATATACCTTGAGAGCTTATATGTTCGTGGCTTTCCAGCAGTAGATCTGAAGATTGTGTTCCTCCCTTTACTAACATTTGAAGTCATTATTCTAATTGACAATTTTAGAATGTGTAAAGCTCTAATGCCAGGGGATGAAGAAAGCATGAGTGATGAAGCAATATGGGAAACTCTTCCTCACTTTTGGGTTGCCATCTCCATGGTGTTCTTCGTAGCTGCTACAGTATTCACACTCCTAAAACTGAGTGGTAGTGTAGCTTCTCTTGGTTGGTGGGACTTATTTATTAACTTCACTATTGCCGAGTGCTTTGCGTTTCTCGTATGTACAAAGTGGTCCAATCCTGTCATTCATAGAAGTTCCAGAGAACcgagttcttcttcttctactacaATTAGATATCTTGACTGGAACAGTGGTTTACTGGTTTCTTCAGAAGAAGATCAACGTCAGGCGAGAATCTGTACCCTGCAAGACATAGGGGGTCATTTCATAAAAGTACCCATTATTGTCTTCCAGGTTCTTCTTTGCATGCATTTAGAGGGAACTCCAGCTATTGCTGCACAATTACCTCTCGCGGTTCTTTTTTCTCCCCTTTTCGTACTGCAAGGTGTTGGTGTGATATTATCTGCATCTAAATTTGTGGAGAAACTTGTGCTTCTTCTACGAAGCGGAGCTGGCGGAGGACTTTATTTTAGAATCTCTTCCAGAGCTCATGATTGCTTGGGATTTTTGCACCATGGTTCTAGGTAA 1020 0.401 MSWSRVLKSAQALAAHIFLLCFTLLLLLKLDHQISSSWWIIFLPLWMFHGVVARGRFSLPAPSAPRNRHWAPCHAVVAMPLLIAFELLLCIYLESLYVRGFPAVDLKIVFLPLLTFEVIILIDNFRMCKALMPGDEESMSDEAIWETLPHFWVAISMVFFVAATVFTLLKLSGSVASLGWWDLFINFTIAECFAFLVCTKWSNPVIHRSSREPSSSSSTTIRYLDWNSGLLVSSEEDQRQARICTLQDIGGHFIKVPIIVFQVLLCMHLEGTPAIAAQLPLAVLFSPLFVLQGVGVILSASKFVEKLVLLLRSGAGGGLYFRISSRAHDCLGFLHHGSR 339
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03845 339 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 1 339 - -
Tsu04g03845 339 Pfam Transmembrane Fragile-X-F protein 28 291 IPR019396 -
Tsu04g03845 339 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 339 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tsu04g03845 Tsu-Chr4 47322825 47327443 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03845 1 339 C3H Transcription Factor Family AT1G18470 75.294 0.0 528
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03845 - - gmx:100791390 582.408
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03845 04 47322825 47327443 Tsu04g03845 04 47322825 47327443 ECH