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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Tsu04g03816
atgtcTTTGATCTCTCAAGAAATAGATAAATccaatgagaagaaaaaaagtacTACTATTAAGAAAGTtccaaaaatatcaaacaaggGTCAGAAAAAGTATCTAGGAGTAAGACAAAGACCTTCAGGAAGATGGATAGCTGAGATCAAAGACTCATCACAGAAACTAAGACTATGGTTAGGAACATTTGACAGAGCAGAAGATGCTGCTATGTCTTATGACTCTGCTGCAAGACTTCTTAGAGGAAGAAATGCTAAAACAAATTTTCCAAATACTCATGAACAAGATTTCAGCATTTTAGGGAAGAATCCAAGAGCTTTTCAGCTTCTTAAACATGCAATGATGAAAAACCATGcagtttcatcttcttcatctgtTTATTCTAGTTTCATGATGCCTTGGAAAAATGATCAGCTCGACGCGATTGTCGAGGATACTATTGTTTGTTCTATTCCTGATGAAGGTGAAGGTTCTTCTATAGGGTGTAGTGGAATTTCATTTGGAAGTTCTAAGGTTTATTCTTCTGTTGTTGTTGCTCCTTCTTTTAATTAG
552
0.3116
MSLISQEIDKSNEKKKSTTIKKVPKISNKGQKKYLGVRQRPSGRWIAEIKDSSQKLRLWLGTFDRAEDAAMSYDSAARLLRGRNAKTNFPNTHEQDFSILGKNPRAFQLLKHAMMKNHAVSSSSSVYSSFMMPWKNDQLDAIVEDTIVCSIPDEGEGSSIGCSGISFGSSKVYSSVVVAPSFN
183
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Tsu04g03816
183
Gene3D
AP2/ERF domain
32
91
IPR036955
GO:0003700|GO:0006355
Tsu04g03816
183
PRINTS
Ethylene responsive element binding protein signature
34
45
IPR001471
GO:0003700|GO:0006355
Tsu04g03816
183
PRINTS
Ethylene responsive element binding protein signature
56
72
IPR001471
GO:0003700|GO:0006355
Tsu04g03816
183
MobiDBLite
consensus disorder prediction
1
20
-
-
Tsu04g03816
183
PANTHER
SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR
4
182
-
-
Tsu04g03816
183
SMART
rav1_2
33
96
IPR001471
GO:0003700|GO:0006355
Tsu04g03816
183
SUPERFAMILY
DNA-binding domain
33
91
IPR016177
GO:0003677
Tsu04g03816
183
CDD
AP2
32
92
IPR001471
GO:0003700|GO:0006355
Tsu04g03816
183
Pfam
AP2 domain
33
82
IPR001471
GO:0003700|GO:0006355
Tsu04g03816
183
ProSiteProfiles
AP2/ERF domain profile.
33
90
IPR001471
GO:0003700|GO:0006355
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Tsu04g03816
Tsu-Chr4
47040448
47040999
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Tsu04g03816
15
91
AP2-EREBP Transcription Factor Family
AT5G19790
60.256
4.94e-27
101
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
AP2 or ERF-ERF
Tsu04g03816
AP2
8e-10
CL0081
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Tsu04g03816
-
K09286
var:108340966
241.506
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Tsu04g03816
04
47040448
47040999
Tsu04g03816
04
47040448
47040999
ECH
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