Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03815 ATGGCAATGGAGATTACTGCTATGGCTTCActaccaacaacaacaagagCTTCTCTTCCAACTCCTTCAACTTCACCTCACACAATCACTACTTTCTCAAAACCTCAATTTAAACGCATATCATTACCAACTTCAACCACCATTTCATTACTTTCTCTCTTCACCATTCCAAATGAAGCTAGAGCTGCTGTTAATATCTCCAAGGACCAAATTGTTTCTTCTATCACCCAAgtGGAGCAGACAATTGATCAGGTTCAGGAGGTAGGTTCTGGTTTTTTGGACTCAGCACAACGTGTTGCTGAAGCTATAGGGAATGTTTTGAAGCCTGGTATCGATGCCGGGTTGCCAATTGTGCAGCAGGTTGGGGAAGAAGCCTTGAAATTTGCTTCACCAGCTTTCTCTGAGGCTTCTAAGAAGGCTCAAGAAGCACTTCAAAGCTCTGGTGTTGATACACAACCTGTTTTCAGTGCTGCTAAGaCAGTGGCAGATGCTGCACAACAAACAACCCAGGCGATTGAAGGTGCCAAGCCAATAGCCTCATCAACTATCCAAACCATATCTACTTCAGATCCTACTGTGATTGCTGGAACAGCTGGTGCACTATTTGTTGCATATCTCTTGTTTCCTCCAATCTGGTCTGCCATTTCCTTCAATTTTCGCGGTTACAAAGGAGACCTGACACCAGCTCAAACACTTGATGTGTTATGCACACAAAACTAcgttttgattgatgttaggTCAGAGAAGGATAAGGACAAGTCCGGTATCCCTCGCCTTCCGTCTAGCGCTAAAAACAAAATGGTTGCTATTCCATTGGAAGAAGTGCCAAACAAGATAAAAGGACTAGTGAGGAATGTGAAGAGAGTGGAAGCTGAAATAGCAGCATTAAAGATTTCATATctgaagaaaatcaacaaaGGCTCAAACATAGTGATATTGGACTCGTACTCGGACTCGGCAAAGATAGTTGCAAGAACGCTAACCGGGCTTGGATTTAAGAACACATGGATAGTTGGTGATGGATTTTCCGGAGGCAGAGGGTGGTTACAAAGTAGATTAGGAACGGATTCGTATAAATTTTCGTTTGCAGAGATCTTGTCTCCATCAAGAATCATCCCTGCAGGTGGTACTAGAAGTTTTGGAACAACCAGAGGGCAGAAACTTCTTCCTGGAGCTGACTGa 1182 0.4154 MAMEITAMASLPTTTRASLPTPSTSPHTITTFSKPQFKRISLPTSTTISLLSLFTIPNEARAAVNISKDQIVSSITQVEQTIDQVQEVGSGFLDSAQRVAEAIGNVLKPGIDAGLPIVQQVGEEALKFASPAFSEASKKAQEALQSSGVDTQPVFSAAKTVADAAQQTTQAIEGAKPIASSTIQTISTSDPTVIAGTAGALFVAYLLFPPIWSAISFNFRGYKGDLTPAQTLDVLCTQNYVLIDVRSEKDKDKSGIPRLPSSAKNKMVAIPLEEVPNKIKGLVRNVKRVEAEIAALKISYLKKINKGSNIVILDSYSDSAKIVARTLTGLGFKNTWIVGDGFSGGRGWLQSRLGTDSYKFSFAEILSPSRIIPAGGTRSFGTTRGQKLLPGAD 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03815 393 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 13 387 IPR044690 GO:0009704|GO:0071277|GO:0090333
Tsu04g03815 393 CDD RHOD 230 344 - -
Tsu04g03815 393 ProSiteProfiles Rhodanese domain profile. 236 357 IPR001763 -
Tsu04g03815 393 Gene3D - 224 362 IPR036873 -
Tsu04g03815 393 PANTHER CALCIUM SENSING RECEPTOR, CHLOROPLASTIC 13 387 - -
Tsu04g03815 393 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 202 344 IPR036873 -
Tsu04g03815 393 MobiDBLite consensus disorder prediction 9 29 - -
Tsu04g03815 393 Coils Coil 279 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03815 Tsu-Chr4 47030094 47033079 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03815 7 315 Sulfurtransferasese or Rhodanese AT5G23060 68.910 6.93e-153 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03815 - - gmx:100813363 560.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03815 04 47030094 47033079 Tsu04g03815 04 47030094 47033079 ECH