Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03809 ATGGAaggtgatgattttgatgttgattttgAATCGAATGATGACGAGACTTATTTAGTATCAAGTGAGGATGAAAGTACAGAGGATGGCGATTGTGCATCTGATAATGGCATTGGTGAAGGAGATGTAAATGTAGCTGATAGTCTGTATGGGAAAAGTAAAGGTTTTGCTGTTAGGAAAAGTGACAGTAGGATAAGAGAAGGGCCTGAAGGTGAAAAACTAATAGTAGTAAAGCAGTTTGTATGCAACAAAAATGGattaagagagaaaaaacacTTGTGTAGGACAGATAGGAAATTAGAGCATAGACGTATGAGCCGTACTAAATGTCTAGCTAAGCTTCGTTTGAAACTCAACCttgaaaaagatatatataaagTTATAGGGTTTGTAGAGACGCATAACCATGAATTAACCCCTTCTAGGATGGTGCACTTATACCCCATGTATCGTAAAATTTCTGAGGCCGATAAGGCTCAGATTGATGGTCTGCATACACGGGGAATTAGAACATGTCATATTATGGGTCACATGGTTGCACAAAAGGGTGGTTATGTTGATGTTGGATTTACAAAGAAAGATTTGTACaactattttgataaaaaaatgcgtGCTGTTATTAAAGACGGTGATGTTGCTGCCGCATTAAATTATCTAAACATGAAGTCGTCTTCTGATCCCATGTTATATGCTAAGTATTCTGTGAACGAGAGTGATGGAAGAATGAAATCGCTTTTTTGGGCAGATGAACAAGGGGAAAAACCAAGTGTTGATGTGGACTCGGTGTCGATATCTGATTCAGTAAGCCAAATTGCTGagaagaagaaaagaaaagcaagTGGCAATGGTGAAAGAAGTTTACAAAACAAATCTTCTCATCCACCGAAAGACCGTAGCGCTAATGTCGGAATGACAACACCTAATGGGATACCAAGCACAAGTGGACACTTGCATCCAATGTATGGACTTCAACCTCTCATGCCTATGGTACATCCAATGATTCAACCGATGAATGTACGACCGATGTACCCAATGTATGGAATGAGTGTTGGGCAAACTTCAAATTCGTGTTACGGTCTACTACAACAAGTCATGAGGGGCCCTAATGAGGATTGA 1116 0.3665 MEGDDFDVDFESNDDETYLVSSEDESTEDGDCASDNGIGEGDVNVADSLYGKSKGFAVRKSDSRIREGPEGEKLIVVKQFVCNKNGLREKKHLCRTDRKLEHRRMSRTKCLAKLRLKLNLEKDIYKVIGFVETHNHELTPSRMVHLYPMYRKISEADKAQIDGLHTRGIRTCHIMGHMVAQKGGYVDVGFTKKDLYNYFDKKMRAVIKDGDVAAALNYLNMKSSSDPMLYAKYSVNESDGRMKSLFWADEQGEKPSVDVDSVSISDSVSQIAEKKKRKASGNGERSLQNKSSHPPKDRSANVGMTTPNGIPSTSGHLHPMYGLQPLMPMVHPMIQPMNVRPMYPMYGMSVGQTSNSCYGLLQQVMRGPNED 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03809 371 MobiDBLite consensus disorder prediction 1 40 - -
Tsu04g03809 371 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 50 252 IPR031052 GO:0006355
Tsu04g03809 371 Pfam FAR1 DNA-binding domain 50 139 IPR004330 -
Tsu04g03809 371 MobiDBLite consensus disorder prediction 1 31 - -
Tsu04g03809 371 MobiDBLite consensus disorder prediction 284 313 - -
Tsu04g03809 371 PANTHER OS02G0262500 PROTEIN 50 252 - -
Tsu04g03809 371 MobiDBLite consensus disorder prediction 257 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03809 Tsu-Chr4 46987080 46991061 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu04g03809 FAR1 1.6e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03809 - - ccaj:109792835 252.292