Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03807 ATGTGTTCACCTTTCTTTTTTGAGCATAAAAACCCCTTATTCAGAAAAGccttccatcaatccaaacctGCTGGAAATAACCAACAAACTGAACAAGTGTGTAGTTTTTTCCGAAAACCAGTTAATTATGAAGATTCTTTGATGCATTTCGACAGCAAAGCAACAACTCTAGAGACTGAGACCGATTTTTCAAATGATGCTCGTGCCAGGTGTGAAAGAGCTATTAAGCAAGCATCAGAGACTCTTAAGGGAAAGGGAACTAGCTCCGAGGATGGAAAATTATACAAGGGAATGAATAATTTCGGAGAGAGCACACAATTTCTGGTGAAAAAGCTGGTGGGTCGCACGGTCCTCTTAGGGCTTTGTGTCATATTAGAGTTTCAGCTAGGTTTGATTATCAACCTGATATATGTAAAGATTACAAGGAAACCGGATACTGTGGATACGGGGATTCATGTAAATTTATGCATGATCGAGGCGATTATAAATCTTGGTGGCAGATGGAGAAGGAATGGGAAGAAGCTGAGAAAGAAAGGAGGATGCGATTGGCTGCAGAAATCCATTTGTGGATCCTGTATCAACGAAGTGCAAACACTACTTCTGCGAGCATTGTGCATTGAAGCATCATGCAAAGAATAA 639 0.3912 MCSPFFFEHKNPLFRKAFHQSKPAGNNQQTEQVCSFFRKPVNYEDSLMHFDSKATTLETETDFSNDARARCERAIKQASETLKGKGTSSEDGKLYKGMNNFGESTQFLVKKLVGRTVLLGLCVILEFQLGLIINLIYVKITRKPDTVDTGIHVNLCMIEAIINLGGRWRRNGKKLRKKGGCDWLQKSICGSCINEVQTLLLRALCIEASCKE 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03807 212 PANTHER ZINC FINGER PROTEIN 183 48 102 IPR039971 -
Tsu04g03807 212 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 1-LIKE 48 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03807 Tsu-Chr4 46969044 46970135 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03807 44 101 C2H2 Transcription Factor Family AT1G01350 44.928 6.51e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03807 K13127 - gmx:100817146 80.8777