Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu04g03781 | ATGCAGGAAATACATTCCATCGGAGGCGGCGGAACCAGATTCTTCGGCGGCGGTGGAAGCGGTGATCGGAGACTTAGaccaaaccaaaacaacaacaacagccaAAGCCAACCAGTCTTGAAATGTCCTCGCTGTGAATCCATCAACACAAAATTCTGCTACTATAACAACTATAACCTCTCTCAGCCACGTCACTTCTGCAAAAACTGTCGTCGTTACTGGACTAAAGGCGGTGTCCTCCGTAACGTCCCTGTCGGTGGCGGTTGCCGTAAATCTAAACGCTCAACCAAACCTAAAAACACTTCCTCCTCATCGGAAATCTCTCCTTTACCGATGACTCCACCGGAGAACAAATCAAACTCTCACTCAAGCAGTGAGAGTTCTAGCCTCACCGCCGCTGCGGTGACCGAGACTGTTTCAGAACAAAAACCGCTAAACTCTAACACGAAAATCAACACTGGTTTGGAGAATGATTCACTAGGTGATTGCGGTATTTTCTCAGAGATCGCGAATTTTACAAGCTTGATCACTTCTTCCTCTAACGAGACATTGCCGTTTGGATTCGGTAACTGTAACGGCAACAGTAACGGTAACGGTAACTGTCTGACCGATGCGTCGTCTTTTCAGTGGCAAAACCAAAAAGTGATGGATCAACAGAATCATCATCATGAAGATGCATCATTGAAGTTGTTACCGGAGAATATTGGTTCTGGATCGTTGATGGACCACAGTATTGATTTCTCTTTGCTGCAGAGTAAAACTACCAACGGTGGATTTGGATCGTTGGATTGGCAAGGTGGTGCAGATCAAGGTTTGTTTGATCTTCCTAACACCGTTGATCAAGGTTACTGGAATCATACACACTGGACTGATCAGGATAATGACAATTCTACCCTCTTTCATCTTCCTTGA | 912 | 0.4419 | MQEIHSIGGGGTRFFGGGGSGDRRLRPNQNNNNSQSQPVLKCPRCESINTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKSKRSTKPKNTSSSSEISPLPMTPPENKSNSHSSSESSSLTAAAVTETVSEQKPLNSNTKINTGLENDSLGDCGIFSEIANFTSLITSSSNETLPFGFGNCNGNSNGNGNCLTDASSFQWQNQKVMDQQNHHHEDASLKLLPENIGSGSLMDHSIDFSLLQSKTTNGGFGSLDWQGGADQGLFDLPNTVDQGYWNHTHWTDQDNDNSTLFHLP | 303 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu04g03781 | 303 | MobiDBLite | consensus disorder prediction | 24 | 39 | - | - | |
Tsu04g03781 | 303 | MobiDBLite | consensus disorder prediction | 98 | 152 | - | - | |
Tsu04g03781 | 303 | ProSiteProfiles | Zinc finger Dof-type profile. | 40 | 94 | IPR003851 | GO:0003677|GO:0006355 | |
Tsu04g03781 | 303 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 8 | 293 | IPR045174 | GO:0003700|GO:0006355 | |
Tsu04g03781 | 303 | PANTHER | DOF ZINC FINGER PROTEIN DOF5.4 | 8 | 293 | - | - | |
Tsu04g03781 | 303 | MobiDBLite | consensus disorder prediction | 85 | 152 | - | - | |
Tsu04g03781 | 303 | ProSitePatterns | Zinc finger Dof-type signature. | 42 | 78 | IPR003851 | GO:0003677|GO:0006355 | |
Tsu04g03781 | 303 | Pfam | Dof domain, zinc finger | 39 | 94 | IPR003851 | GO:0003677|GO:0006355 | |
Tsu04g03781 | 303 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu04g03781 | Tsu-Chr4 | 46717966 | 46719803 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu04g03781 | 22 | 303 | C2C2-Dof Transcription Factor Family | AT5G60850 | 41.613 | 1.43e-55 | 181 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-Dof | Tsu04g03781 | zf-Dof | 1.2e-32 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu04g03781 | - | - | mtr:MTR_4g109980 | 387.111 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Tsu04g03781 | 04 | 46717966 | 46719803 | Tsu04g03781 | 04 | 46717966 | 46719803 | ECH |