Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03769 ATGCTAGTAATCTTGGAAGGTGAGAGTGATAAGAGTAATGAATGCATCTACACTTTTATTGTAGTTGTTATATATGGAGCTAATTTGACGATCAAGGGTGACATGTCCTCAGATGATCTTACATCTTTCATTCTGTATAGTCTCTCAGTTGGATCTTCTGGTTTGTCGGGATTGTATACTGTAGTTATGAAAGCTGCTGGAGTTATCAGAAGGGTATTTCAACTGTTGGATCGTGTCTCATCCATGCCTAAGTCGGGAGATAAATGTCCTCTGGGTGAACAAGTTGGAGAAGTGGAACTAAATGGTGCTCAAGTCATTGCTCATAGGTTATCAACCGTTAAAACTGCTAATATCGTTGCAGTTGTTTCTGATGGCCAAATAGTCGAGAATGGTACTCGTGATGAGCTTCTTGACAAGAATGGTCTTTATACTGCATTAGTAAGGAGACAACAAAAACCGAAATCTAATCTATGCCTTGAAAATTATGAACCACATTACTTGTGA 504 0.3869 MLVILEGESDKSNECIYTFIVVVIYGANLTIKGDMSSDDLTSFILYSLSVGSSGLSGLYTVVMKAAGVIRRVFQLLDRVSSMPKSGDKCPLGEQVGEVELNGAQVIAHRLSTVKTANIVAVVSDGQIVENGTRDELLDKNGLYTALVRRQQKPKSNLCLENYEPHYL 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03769 167 SUPERFAMILY ABC transporter transmembrane region 18 77 IPR036640 GO:0005524|GO:0016021
Tsu04g03769 167 Gene3D ABC transporter type 1, transmembrane domain 14 103 IPR036640 GO:0005524|GO:0016021
Tsu04g03769 167 PANTHER ABC TRANSPORTER B FAMILY MEMBER 25 105 152 - -
Tsu04g03769 167 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 105 152 IPR039421 -
Tsu04g03769 167 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 150 IPR027417 -
Tsu04g03769 167 PANTHER ABC TRANSPORTER B FAMILY MEMBER 25 18 101 - -
Tsu04g03769 167 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 18 101 IPR039421 -
Tsu04g03769 167 Gene3D - 105 153 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03769 Tsu-Chr4 46625959 46627467 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03769 105 151 Calmodulin-binding Proteins AT2G36910 48.980 5.10e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03769 - - gmx:100818615 126.716