Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03764 ATGATGATAGAAAATTCTTGTTCAACTGGTAAAGGTTATAATCATGAATCAAAccaacaagaagatgaaaatggaacaATGAAATTCTCCAACAAAGCAATAGCTACATCAAGACAATGGACATCATTAAGAAATCCAAGAATTGTGAGAGTGTCGCGTTCTTTAGGCGGAAAAGATAGACATAGCAAAGTATGCACAATTCGAGGATTAAGAGATCGTCGAATTAGGTTATCTGTACCAACAGCAATTCAGTTATATGATCTTCAAGATAGACTTGGTTTAAGTCAACCTAGTAAAGTTGTTGATTGGTTAATTGAAGCAACACAATCTGATATTGATAAATTACCACCACTTCAAAATATTCCTCAATGTTTTACTACTCCACAACAAACCCTATTGCATCAACAAGGTGGTTTTtatgatcatcatcatcaaatcaaaGGTAAAGAAGTCGAAATTAGTTCGGAAAAGggtaattataattattacaaTAACTCTTGTTCTAATTATTCTTCAAGTGGTTTTCCATATAACTTGGATCCTTCAAGTACTCTAACTTTATCTCAATTTGGAAGCAATAACAATCATGGTAATTTATTTGGAAGCAGCGGTATGAAATTTTCGTCTGGTAATTCTTCGCAGTTACTTTTTTGTCCATCTTCTAATTCTGCTATGCCAGCATCACTTTTTAGTAGTAGTACTAATCTGCAGCAAAATGCTCCATCAATGGAAATTAGTAGTGATGGTCAAAGACAATTCACCAATGTTGAGATCTTGAATTCATCATCAACAAGTTCATTCATTCCATCTCTTCAACTTCCAATCAATTCGCCTTTTAGACGTCTTCCAATGCCTTTTATAAATTCCAAGGTTCTTGATTCAGATCATAATAACACCAGAAATTGA 906 0.3146 MMIENSCSTGKGYNHESNQQEDENGTMKFSNKAIATSRQWTSLRNPRIVRVSRSLGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVVDWLIEATQSDIDKLPPLQNIPQCFTTPQQTLLHQQGGFYDHHHQIKGKEVEISSEKGNYNYYNNSCSNYSSSGFPYNLDPSSTLTLSQFGSNNNHGNLFGSSGMKFSSGNSSQLLFCPSSNSAMPASLFSSSTNLQQNAPSMEISSDGQRQFTNVEILNSSSTSSFIPSLQLPINSPFRRLPMPFINSKVLDSDHNNTRN 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03764 301 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 2 301 - -
Tsu04g03764 301 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 301 IPR005333 GO:0003700
Tsu04g03764 301 Pfam TCP family transcription factor 57 140 IPR017887 -
Tsu04g03764 301 ProSiteProfiles TCP domain profile. 57 115 IPR017887 -
Tsu04g03764 301 MobiDBLite consensus disorder prediction 1 15 - -
Tsu04g03764 301 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03764 Tsu-Chr4 46573590 46575340 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03764 40 139 TCP Transcription Factor Family AT5G60970 74.257 1.21e-46 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Tsu04g03764 TCP 1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03764 - - mtr:MTR_4g109660 334.724