Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03748 ATGTCTTTGTGGATCATTGTCTTTGTTACAATTGCAGCAGCTATTCTCATAAACCGACTTCTAAACCTCATAACAAAACCTTCCTTACCTCTTCCACCTGGGCCAAGCCCATGGCCCATCGTCGGAAACCTACCTCACATGGGCCCAGTCCCACACCACGCTCTAGCCGCCTTAGCCCAAAAACACGGCCCTCTAATGCATCTTCGATTAGGTTTTGTCGATGTAATTGTTGCCGCCTCTGCCTCGGTGGCCGAACAATTCTTAAAAGTTCATGATGCTAATTTCTCTAGTCGGCCGCCTAACTCCGGCGCAAAATATATTGCTTATAATTATCAAGATCTTGTTTTTGCTCCCTATGGACCACGGTGGCGGTTGTTAAGGAAAATATCTTACGTTCACATGTTCTCTTCTAAGGCTTTGGATGATTTTAAACACATACGTCAGGATGAGGTAGCAAGATTGATCCACAACTTATCAAGTACAGGTAGCAAAGCAGCAAACTTAGGACAAATGTTAAATGTATGTACAACAAATGCATTAGCTAGGGTAATGATAGGACGGCGAGTATTTAATGAAGGGAACGGTGGTTGTGAATGTGATCCTAGGGCTGATGAGTTTAAGTCAATGGTAGTTGAACTTATGGTGTTAGCTGGAGTTTTCAATATTGGTGATTTTGTTCCTTCTTTAGAATGGTTAGATATTCAAGGTGTACAAGGCAAAATGAAGAAATTACATAAAAGATTTGATGCATTTTTAACTAGCATTATTGAAGATCACATGATTTCCAAGAGTGAGAAGCATAATGACTTGTTGAGTACGTTGTTATCactaaaagaaaaagttgatgAGGATGGCGATAAACTTAATGATACTGAGATCAAAGCATTACTCTTGAACATGTTTACAGCTGGAACAGACACATCATCAAGCACAACAGAGTGGGCTATTGCTGAACtaataaaaaatccaaaactaaTGATTCGCATCCAACAAGAGTTGGACACTATTGTGGGCCGAGATAGACTTGTAACTGAACAAGACTTAGCCCATCTTCCTTACTTGGAGGCTATAATAAAGGAAACATTTCGTCTCCATCCATCAACCCCTCTTTCTCTACCACGTGTCGCGACAAATAGTTGTGAAATCTTCAACTACCATATTCCCAAAGGTGCAACTCTATTGGTTAATGTTTGGGCCATATCACGTGACCCCAAAGAATGGGCTAACCCATTGGAGTTTAAGCCTGAAAGGTTTCTCCCCGGCGGTGAGAAGTTTGATGTTGATATTAAGGGAAATGATTTTGAAGTTATACCATTTGGTGCCGGACGTAGAATATGTGCTGGAATGAGTCTTGGTCTTAGGATGGTTCAACTTCTCACTGCATCATTGGTACATGCATATGATTGGGAGTTGGAGAATGGGCTAAGTCCTGAAAAACTTAACATGGATGAAGCATATGGGCTTACTTTACAAAGGGCAGTGCCTATTTTGGCCCACCCTCGTCCAAGGCTTTCACCACATTTGTACTTGTAA 1533 0.4064 MSLWIIVFVTIAAAILINRLLNLITKPSLPLPPGPSPWPIVGNLPHMGPVPHHALAALAQKHGPLMHLRLGFVDVIVAASASVAEQFLKVHDANFSSRPPNSGAKYIAYNYQDLVFAPYGPRWRLLRKISYVHMFSSKALDDFKHIRQDEVARLIHNLSSTGSKAANLGQMLNVCTTNALARVMIGRRVFNEGNGGCECDPRADEFKSMVVELMVLAGVFNIGDFVPSLEWLDIQGVQGKMKKLHKRFDAFLTSIIEDHMISKSEKHNDLLSTLLSLKEKVDEDGDKLNDTEIKALLLNMFTAGTDTSSSTTEWAIAELIKNPKLMIRIQQELDTIVGRDRLVTEQDLAHLPYLEAIIKETFRLHPSTPLSLPRVATNSCEIFNYHIPKGATLLVNVWAISRDPKEWANPLEFKPERFLPGGEKFDVDIKGNDFEVIPFGAGRRICAGMSLGLRMVQLLTASLVHAYDWELENGLSPEKLNMDEAYGLTLQRAVPILAHPRPRLSPHLYL 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03748 510 Gene3D Cytochrome P450 24 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03748 510 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03748 510 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03748 510 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03748 510 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03748 510 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03748 510 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03748 510 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03748 510 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03748 510 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03748 510 PANTHER FLAVONOID 3'-MONOOXYGENASE 4 501 - -
Tsu04g03748 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Tsu04g03748 510 Pfam Cytochrome P450 32 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03748 510 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03748 510 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03748 510 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03748 510 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03748 510 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 501 - -
Tsu04g03748 510 SUPERFAMILY Cytochrome P450 32 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03748 Tsu-Chr4 46441265 46445139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03748 31 509 Cytochrome P450 AT5G07990 69.231 0.0 727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03748 K05280 - gmx:547475 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03748 04 46441265 46445139 Tsu04g03748 04 46441265 46445139 ECH