Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03732 ATGTCAGACTTGCAGGAAACACATTTCTGTTGCTTCCTATTTTTACTCTCAATTTCCTTCATCTTTCTTTCAGGTAGTTTAGTTGTTGGAGATTCTTTGGACACAGACAAACAAATTCTGTTGAAGTTGAAAAACTACCTAGACAACAAAACTCTTGCAGACCAAGGAAAGTACATATATTGGAACACTAAtacttcaaattcaaatccatGTCAATGGCAAGGAATCTTGTGTAGCAAAGAAAAGAGAGTAATTGGTATAGATCTATCTAACAGTGACATCACAGGAGAGGTATTTCAAAGCTTCTCTCAGCTCACCGAGCTAACGCGCCTCGATCTCTCGCAGAATACGCTGTTCGGATATATTCCGGATGACTTGAGGAACTGTCAAAAGCTATTGTATCTCAATCTCTCTCATAATATTCTTGATGGAGAATTGAATGTAACTGGATTGAAAACCTTGCAGACACTTGATTTGTCCTTGAATAGATTTCATGGAGAACTTGGTTTGTTGAATTTCCCTTCCATTTGTGGAAATTTGGTTACATTGAATATCTCAGGTAATAACTTAACTGGTGAGATTGGTAATAGTTTTGATCAATGTTCCAATTTGAAGTATTTGGATTTGAGCACTAATAAGTTGAGTGGAAGTATATGGAATGGATTTGCAAGGCTTACACAGTTTTCTGTTGCTGAGAATAATCTCAATGGAAACATTTCATATGAAGCTTTTCCATTGAATTGTGAACTTGTTGAATTAGACCTTTCTCAAAATGGATTTGTTGGTGAGGCACCAAAGGAAGTTGCTAACTGCAAGAATCTAACCATGTTGAATCTTTCAACCAACAAGTTTACCGGTGCTATCCCTATTGAAATGGGGTCTATTTCAAGGCTTAAAGGATTGTACTTGGGAGGAAACAACTTTTCAAGAGATATTCCTGAGACCCTTTTGAATTTGACTAATTTGGTTTTCTTGGATTTGAGCAGAAACAAATTTGGTGGTGACATACAAATGATATTTGGAAAGTTTAAGCAGGTTAGATTTCTTCTGTTGCACTCTAATTCTTACACTGGAGGGCTAAGATCATCTGGAATTTTTACATTGCCGAATATTACGCGGTTAGACCTAAGCTACAACAACTTTTCAGGTCCATTACCTGTTGAAATCTCTCATATGCATAGTCTAAAACTTCTAATGTTATCATATAACCAATTCAATGGATCTATTCCATCAGAATTTGGAAATATGCATAACTTGCAAGCACTTGACCTTGCTTTCAACAAGTTGAGTGGATCAATACCTCCGAGCCTCGGAAACTTGAGTTCGCTCTTGTGGTTGATGCTTGCAGACAATTCATTAACCGGATCAATCCCTCCAGAGATAGGGAACTGTACTAGTTTGTTATGGCTAAACCTCGCTAACAATAACCTCTCCGGAAACTTTCCTCGGGAACTTGCCAAAATTGGGAGGAATGCAATGACAACATTTGAAGCAAATAGGCGAGACGATGTAATTGTTGCTGGTTCTGGTGAATGTTTAGCAATGAAGAGATGGATACCGGCAGATTACCCTCCGTTCAGTTTTGTGTATGATAtcttaacaagaaaaaattgtaGAGAACTTTGGAATAAATTGCTAAAAGGGTATGGAATTTTTCCATTTTGCACACCTGGTTCCTCCCTTAGGTTACCTGTGATATCTGGTTATGTTCAGTTAAGTGGAAACAAGTTAAGTGGTGAAATCCCTTCAGAGATTGGAACAATGGTGAATTTCAGTATGTTGCAGTTGGGATTCAACAGTTTCTCTGGGAAATTCCCACCAGAGTTGGGAAATCTTCCCCTTATGGTCTTGAACATGACTAGAAACAACTTTTCAGGTGAAATTCCTATAGAAATTGGAAACTTGAAATGCTTACAAAATCTTGATTTGTCTTGCAACAATTTCTCTGGGAATTTTCCAACAAGTTTGAACAAAGTGTCTGAGCTTAACAAGTTTAACATCTCCTACAATCCCTTCATATATGGTTCAGTCTCATCAAGTGGCCAATTTGGTACTTTTGATAAAGACTCATATTTAGGTGACCCTCTTTTGATTCTTCCAAAGTTCATTGATAATAGTAGCACCGGAAACAATGAAAGCATCACCTCTCACCACAAAAACCATAAAAAGCCTGCAAGGTTGTCTGTGTTTTTGGCTTTTCTAGCCATAACACTTGTTTTTGTTATATGTGGTCTTCTAACAATAATAGTTTGTGCATTAGTTAAAAGTCCATCAGATCAATATCTCTTGAGGGATCATATAAAACATTGCAATGATTCAAGCAGCTCAGGAATAGGATCCTCGTCGCAATGTTTATCTGATTCGGTTAAAGTCATTCGTTTAAACAAAACAGCTTTCACCTATGCAGACATTTTGAAAGCAACAAACAATTTCTCAGAGAACAGAATCATAGGAAAAGGTGGATTTGGAACAGTATACATAGGACTTTTCACAGATGGTAGAGAAGTAGCAGTGAAGAAGCTCCTAAGTGAAGGACTCGAAGGCGAAAAGGAATTCCAAGCTGAAATGGAAGTTCTAAGCGGTCACGGTTTCGGTTGGCCTCATCCGAATCTCGTCACACTCTATGGTTGGTGTCTAAACAATTCAGAAAAGATACTTGTTTATGAGTACATCGAAGGTGGAAGCTTAGAAGATCTAATAACCAACACAACCCGTTTGACATGGAAGAAGAGGCTACAAGTTGCTATTGATGTGGCTCGCGCGCTTGTCTATTTACACCACGAATGCAATCCTTCTATTCTTCATAGAGATGTGAAGGCTAGTAATGTGATGCTAGACAAAGAAGGGAAAGCAAAAGTAACAGATTTTGGATTAGCAAGAATTGTTAATGTCGGCGATAGCCATGTGAGTACAATGGTTGCTGGAACTGTTGGATATGTTGCACCTGAATATGGACAAACAATGAAAGCTACTACAAAAGGTGATGTTTATAGTTATGGTGTGTTGGTTATGGAGTTGGCTACAGGTAGAAAAGCAGTGGATGGAGGTGAAGAGTGTCTGGTTGAATGGACAAGGCGTGTCATCGGAAgaaaacaacatcatcaacagcATCATGTGTTGAGTCATTTGGGTTCAAGGCTTGTTGGTGGAGCAGAAGAAATGGGTGAATTGCTATGTATTGGTTTGAAGTGTACAAATGAGGCACCAAATGCTAGGCCAAATATGAAACAAGTTTTGGCTATGCttattttgatatccaaatccAATATTGGAGATTCAAGTGATCATGGACACAttgtttag 3303 0.3736 MSDLQETHFCCFLFLLSISFIFLSGSLVVGDSLDTDKQILLKLKNYLDNKTLADQGKYIYWNTNTSNSNPCQWQGILCSKEKRVIGIDLSNSDITGEVFQSFSQLTELTRLDLSQNTLFGYIPDDLRNCQKLLYLNLSHNILDGELNVTGLKTLQTLDLSLNRFHGELGLLNFPSICGNLVTLNISGNNLTGEIGNSFDQCSNLKYLDLSTNKLSGSIWNGFARLTQFSVAENNLNGNISYEAFPLNCELVELDLSQNGFVGEAPKEVANCKNLTMLNLSTNKFTGAIPIEMGSISRLKGLYLGGNNFSRDIPETLLNLTNLVFLDLSRNKFGGDIQMIFGKFKQVRFLLLHSNSYTGGLRSSGIFTLPNITRLDLSYNNFSGPLPVEISHMHSLKLLMLSYNQFNGSIPSEFGNMHNLQALDLAFNKLSGSIPPSLGNLSSLLWLMLADNSLTGSIPPEIGNCTSLLWLNLANNNLSGNFPRELAKIGRNAMTTFEANRRDDVIVAGSGECLAMKRWIPADYPPFSFVYDILTRKNCRELWNKLLKGYGIFPFCTPGSSLRLPVISGYVQLSGNKLSGEIPSEIGTMVNFSMLQLGFNSFSGKFPPELGNLPLMVLNMTRNNFSGEIPIEIGNLKCLQNLDLSCNNFSGNFPTSLNKVSELNKFNISYNPFIYGSVSSSGQFGTFDKDSYLGDPLLILPKFIDNSSTGNNESITSHHKNHKKPARLSVFLAFLAITLVFVICGLLTIIVCALVKSPSDQYLLRDHIKHCNDSSSSGIGSSSQCLSDSVKVIRLNKTAFTYADILKATNNFSENRIIGKGGFGTVYIGLFTDGREVAVKKLLSEGLEGEKEFQAEMEVLSGHGFGWPHPNLVTLYGWCLNNSEKILVYEYIEGGSLEDLITNTTRLTWKKRLQVAIDVARALVYLHHECNPSILHRDVKASNVMLDKEGKAKVTDFGLARIVNVGDSHVSTMVAGTVGYVAPEYGQTMKATTKGDVYSYGVLVMELATGRKAVDGGEECLVEWTRRVIGRKQHHQQHHVLSHLGSRLVGGAEEMGELLCIGLKCTNEAPNARPNMKQVLAMLILISKSNIGDSSDHGHIV 1100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03732 1100 SMART serkin_6 811 1084 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g03732 1100 Gene3D Ribonuclease Inhibitor 557 714 IPR032675 -
Tsu04g03732 1100 Pfam Leucine rich repeat 369 429 IPR001611 GO:0005515
Tsu04g03732 1100 Pfam Leucine rich repeat 179 227 IPR001611 GO:0005515
Tsu04g03732 1100 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 5 1087 - -
Tsu04g03732 1100 ProSitePatterns Serine/Threonine protein kinases active-site signature. 933 945 IPR008271 GO:0004672|GO:0006468
Tsu04g03732 1100 Gene3D Ribonuclease Inhibitor 247 316 IPR032675 -
Tsu04g03732 1100 Gene3D Ribonuclease Inhibitor 175 245 IPR032675 -
Tsu04g03732 1100 Gene3D Ribonuclease Inhibitor 32 174 IPR032675 -
Tsu04g03732 1100 CDD STKc_IRAK 817 1085 - -
Tsu04g03732 1100 Gene3D Transferase(Phosphotransferase) domain 1 891 1096 - -
Tsu04g03732 1100 SUPERFAMILY L domain-like 47 360 - -
Tsu04g03732 1100 Pfam Protein kinase domain 812 1080 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g03732 1100 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 5 1087 - -
Tsu04g03732 1100 SMART LRR_typ_2 440 464 IPR003591 -
Tsu04g03732 1100 SMART LRR_typ_2 105 129 IPR003591 -
Tsu04g03732 1100 SMART LRR_typ_2 368 391 IPR003591 -
Tsu04g03732 1100 SMART LRR_typ_2 392 415 IPR003591 -
Tsu04g03732 1100 SMART LRR_typ_2 295 319 IPR003591 -
Tsu04g03732 1100 SMART LRR_typ_2 416 439 IPR003591 -
Tsu04g03732 1100 Pfam Leucine rich repeat N-terminal domain 34 79 IPR013210 -
Tsu04g03732 1100 SUPERFAMILY L domain-like 569 676 - -
Tsu04g03732 1100 SUPERFAMILY L domain-like 339 488 - -
Tsu04g03732 1100 Gene3D Phosphorylase Kinase; domain 1 775 890 - -
Tsu04g03732 1100 Gene3D Ribonuclease Inhibitor 328 501 IPR032675 -
Tsu04g03732 1100 ProSitePatterns Protein kinases ATP-binding region signature. 817 840 IPR017441 GO:0005524
Tsu04g03732 1100 SUPERFAMILY Protein kinase-like (PK-like) 793 1084 IPR011009 -
Tsu04g03732 1100 ProSiteProfiles Protein kinase domain profile. 811 1084 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03732 Tsu-Chr4 46296480 46300116 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03732 32 1082 Receptor kinase-like Gene Family AT4G39400 32.729 2.51e-149 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Tsu04g03732 Pkinase 5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03732 - - gmx:100816573 1556.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03732 04 46296480 46300116 Tsu04g03732 04 46296480 46300116 ECH