Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03723 ATGGCGCTGTTCAGAAGATTTTTCTACCGAAAGCCGCCGGATCGGCTTTTAGAGATCTCCGAAAGAGTTTATGTTTTTGATTGTTGCTTCTCCACGGATGTtttggaagaagatgaatacaGAGTTTATATGGGAGGAGTTGTGGCTCAGCTGCAGGATCACTTCCCGGAGGCTTCTTTCATGGTGTTCAACTTCAGAGAAGGGGAGAGACGCACCCAAGTCTCGGACATACTCTCTCAGTATGACATGACAGTTATGGAGTATCCTCGGCAATATGAAGGTTGTCCGCTTCTGCCTCTAGAGATGATCCATCACTTTCTTCGATCAAGTGAAAGCTGGTTGTCTTTGGAGGGGCAACAGAATGTGCTTTTGATGCACTGCGAAAGAGGAGGTTGGCCTGTTCTGGCATTCATGCTAGCAGGTCTCTTGTTATACCGGAAACAGTACACCGGAGAGCAGAAGACTCTTGAAATGGTCTACAAGCAAGCTCCCAGAGAACTACTCCACCTTTTAACTCCTTTGAACCCACAGCCTTCTCAGTTCAGATATCTTCAGTACATTTCAAGGAGACATCTGGGTTCTGAGTGGCCACCATCAGAAACACCCTTGTATCTGGATTGTCTGATTCTTAGAGACCTTCCATTATTTGATGATGGAAAAGGTTGCAGGCCTGTTGTGCGTGTTTATGGCCCGGACCCTTCAAAACCTGCCAATAGAAGTTCAAAGCTTCTTTTTTCAACCTCAAACTCCAAAAAGCATGCTCGACACTATCAACAGGCAGAGTGTATGCTTGTGAAGATTGATATACATTTTCGTGTTCAAGGAGATGTAGTTCTCGAGTGcataaatttaaatgaagattTTACTAGGGAGGAGACGATGTTTAGAATTATGTTCCACACTGCATTTGTGCGGTCAAATATATTGATGTTGAACCGTGATGAAATTGATATTTTGTGGGATGCAAAGGATCAATATCCCAAGGACTTCAAAGCAGAGGTGCTTTTTTTGGACGCTGATGCTGTTATACCTGATGTGAACACAGTCATGGTGAGTGAAAATGCAAATGAGACAGAAAGTGGTGATATAGAAAATGCTTCACCTGAGGAATTCTATGAAGTGGAAGAGATTTTCAGCAATGCAATTGATGCACAGGAAAGTAAGGCAGATGATGATTCTCATACCTTTCATGACAATGCAGTGGGTGGTGAAAATCATAAAGGGATCTTGAGAGAGGATTCGGATCCTCATGCTTTTCAGGATTGCACACCAGATTATGGGATTCTCAAACAGGTTGGAAAGATGGATTCCGGTATTAATGCTGTGAAAGATATATCTGTTGATGATGTTAACTACAAGTTCAATGAGAGCATGGATTCAGATCCTCAAGCAGTGAAGGACATTGCCATGGATGATGGAGAAATTAAGTCAACTTCCACGGCCATGACTTATGATATGACGATACCTCTGGAAACAAAGGAAATCACTGAAGACGCTGATCGGGGATCAGACGATATGCAGAACAAATTTGATGAAGATAACGAAGCAACAGAAAAGGAATTAGATTACAAGGAAGGGCAGCCTATGTCTGATAGCTCCAAGCAAAAATCTGGTAAACTACTTCCATCTACTGCTAAGAAACAATTTCCATCAAACTCAAAGCCAGGAGATACTGTTGGAAAACAAAAGATTAAAGAAACCGCCGCATTTCAGGCAAAACAAGCTAAACCAACTGCAGTGACGAGGTGGATTCCTTCTAACAAGGGTTCTTACACAAATTCGATGCATGTATATTATCCACCATCCAGGATTAATAGTGCACCACCTGGACTATCAAATTTAACCACTTCAAAGGAGAAAATGGAAGATAACAAAGCAAGATCTTCATCTCCTTTTGGCTCTGCAGCACTTGTTTCTGCTGACATGAAAAATGACCTGAAAGGTCGGAAGTTGGCCACTTCGAAATCGCTTGGCCACACAGTATCAGAAAGTGATGCAAAATGTCCACCATCGCCACCATCAAAAGAGACATCTCTTAAGTCAGTTACTCAGGCAGAAGAACAGAGCTCAGAGCAATTGCTACAGTCTCCCCCACGGCCTCCTCCTCCccctcctccaccaccacctccGCCACCACCCTTAACATCATTTATACCGCCCCCACCTCCTCCACCCCCTTTCAGTGCATCTCAGTCTACACCCTCTCCTTTTAGTAGAGCTCCCCCACCCCCACCTCCACCTCCTCCAATGTCTAGAGCCCCTCCGCCTCCACCACCTCCTCCAATGTATGGTGCCCCtccacctcctcctcctccaaTGTCTAGAGCCCCTCCACCTCCTCCCCCTCCTCCAATGTCTAGAGCCCCTCTGCCTCCACCTCCTCCAATGTATGGATCCCCtccacctcctcctcctcctccaatGTCTAGAGCCCCtccacctcctcctcctccaaTGTCTAGAACACCTCCACCTCCTCCGGTGTCTGGAGCCCCTCCACCTCCACCTCCTCCGATGTCTAGAGCCCCTCCACCACCTCCTCCGATGCACGGAgccccaccaccaccacctcctcctGGTGGTCGAGGCCCTCCTCCTCCCCCACCTCCTGGTGGTCGTGGCCCGCCTCCTCCCCCTCCTCCTGGTGGTCGAGGCCCACCTCCTCCACCTCTTCCTGGTGGTGGACCTCCACCACCACCCCCCTTAGGTTCCAAAGGTGCAAGTGTTGGACCTGCACGCCCTGGTCCAGTGGCACCAGGTCGTGGTGGATACGCACGCCCTGGTGCAGTGGCACCCCGACGATCCTCCTTAAAGCCTTTGCATTGGAGTAAGGTTACAAGGGCATTGCAAGGAAGTTTATGGGAGGAATTGCAAAGACACGGAGAACCGCAAATTGCACCAGAGTTTGATGTTTCAGAGCTAGAAAAACTTTTCTCTGCAAATGTTCCAAAACCTACTGATTCAAGTGGCAAATCTGGAGGGAGGCGCAAGTCTACTGGATCTAAACCTGAGAAAGTTCACTTGGTTGACCTAAGGAGGGCCAATAATACGGAAATCATGCTAACTAAGGTTAAGATGCCACTCCCTGATATGATGGCTGCAGTACTGGCTTTGGATGACTCGGTATTAGATGTTGATCAGGTGGAAAATCTCATTAAGTTTTGTCCCACCAAAGAGGAAATGGAACTTTTGAAGGCATACACTGGCGACAAGGAGATTTTGGGGAAGTGTGAACAGTTTTTTTTGGAGCTGATGAAGGTGCCAAGGGTGGAGTCAAAATTAAGAGTATTCGCTTTCAAAATTCAGTTTCAGGCTCAGGTTACAGAATTTAGGAAGAGTTTAAACACTGTGAACTCTGCCTGTGAAGAGGTCCGAAAATCTTACAAACTAAAGGATATCATGAAGAAAATTCTTTTTTTGGGTAATACATTGAATCAGGGAACAGCAAGAGGATCTGCAGTTGGATTTAAATTGGACAGTCTTTTAAAGCTCACTGACACTCGTGCTACTAACAATAAGATGACATTGATGCATTATCTTTGCAAGGTGCTAGCTGAAAGGTCGCCTGGACTCCTTGATTTTCACAAAGACCTTGTTAGTCTGGAAGGTGCCACTAAGATACAATTGAAATCATTAGCAGAAGAGATGCAGGCAATCACCAAGGGGTTAGAAAAGGTTAAACAAGAGCTTGCTGGATCGGAAAATGATGGACCTGTGTCGGAAGTATTCTGTAAGACGTTGAAAGGATTCATTACGGTAGCTGAGTCAGATGTGGCAGGTCTAATAACACTATATTCTACAGTGGGTAAAAATGCAGATGCACTTGCACAGTATTTTGGCGAGGATCCTGCTCGATGCCCATGTGAGCAAGGTAAACTGATCATCAATATGTATTCGTGTTGGATGGTATAA 3912 0.4407 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTDVLEEDEYRVYMGGVVAQLQDHFPEASFMVFNFREGERRTQVSDILSQYDMTVMEYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYTGEQKTLEMVYKQAPRELLHLLTPLNPQPSQFRYLQYISRRHLGSEWPPSETPLYLDCLILRDLPLFDDGKGCRPVVRVYGPDPSKPANRSSKLLFSTSNSKKHARHYQQAECMLVKIDIHFRVQGDVVLECINLNEDFTREETMFRIMFHTAFVRSNILMLNRDEIDILWDAKDQYPKDFKAEVLFLDADAVIPDVNTVMVSENANETESGDIENASPEEFYEVEEIFSNAIDAQESKADDDSHTFHDNAVGGENHKGILREDSDPHAFQDCTPDYGILKQVGKMDSGINAVKDISVDDVNYKFNESMDSDPQAVKDIAMDDGEIKSTSTAMTYDMTIPLETKEITEDADRGSDDMQNKFDEDNEATEKELDYKEGQPMSDSSKQKSGKLLPSTAKKQFPSNSKPGDTVGKQKIKETAAFQAKQAKPTAVTRWIPSNKGSYTNSMHVYYPPSRINSAPPGLSNLTTSKEKMEDNKARSSSPFGSAALVSADMKNDLKGRKLATSKSLGHTVSESDAKCPPSPPSKETSLKSVTQAEEQSSEQLLQSPPRPPPPPPPPPPPPPPLTSFIPPPPPPPPFSASQSTPSPFSRAPPPPPPPPPMSRAPPPPPPPPMYGAPPPPPPPMSRAPPPPPPPPMSRAPLPPPPPMYGSPPPPPPPPMSRAPPPPPPPMSRTPPPPPVSGAPPPPPPPMSRAPPPPPPMHGAPPPPPPPGGRGPPPPPPPGGRGPPPPPPPGGRGPPPPPLPGGGPPPPPPLGSKGASVGPARPGPVAPGRGGYARPGAVAPRRSSLKPLHWSKVTRALQGSLWEELQRHGEPQIAPEFDVSELEKLFSANVPKPTDSSGKSGGRRKSTGSKPEKVHLVDLRRANNTEIMLTKVKMPLPDMMAAVLALDDSVLDVDQVENLIKFCPTKEEMELLKAYTGDKEILGKCEQFFLELMKVPRVESKLRVFAFKIQFQAQVTEFRKSLNTVNSACEEVRKSYKLKDIMKKILFLGNTLNQGTARGSAVGFKLDSLLKLTDTRATNNKMTLMHYLCKVLAERSPGLLDFHKDLVSLEGATKIQLKSLAEEMQAITKGLEKVKQELAGSENDGPVSEVFCKTLKGFITVAESDVAGLITLYSTVGKNADALAQYFGEDPARCPCEQGKLIINMYSCWMV 1303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03723 1303 MobiDBLite consensus disorder prediction 530 558 - -
Tsu04g03723 1303 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 336 IPR035892 -
Tsu04g03723 1303 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Tsu04g03723 1303 Gene3D - 205 336 - -
Tsu04g03723 1303 MobiDBLite consensus disorder prediction 982 996 - -
Tsu04g03723 1303 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Tsu04g03723 1303 MobiDBLite consensus disorder prediction 695 905 - -
Tsu04g03723 1303 MobiDBLite consensus disorder prediction 980 1004 - -
Tsu04g03723 1303 MobiDBLite consensus disorder prediction 487 635 - -
Tsu04g03723 1303 CDD PTP_PTEN-like 16 190 - -
Tsu04g03723 1303 PANTHER FORMIN-J 1 798 - -
Tsu04g03723 1303 PANTHER FORMIN-J 800 1284 - -
Tsu04g03723 1303 MobiDBLite consensus disorder prediction 491 529 - -
Tsu04g03723 1303 MobiDBLite consensus disorder prediction 580 617 - -
Tsu04g03723 1303 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Tsu04g03723 1303 Gene3D Formin, FH2 domain 926 1297 IPR042201 -
Tsu04g03723 1303 MobiDBLite consensus disorder prediction 674 694 - -
Tsu04g03723 1303 SMART PTEN_C2_2 198 338 IPR014020 -
Tsu04g03723 1303 ProSiteProfiles Formin homology-2 (FH2) domain profile. 927 1303 IPR015425 -
Tsu04g03723 1303 SMART it6_source 585 1301 IPR015425 -
Tsu04g03723 1303 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1003 1290 - -
Tsu04g03723 1303 Coils Coil 1209 1236 - -
Tsu04g03723 1303 Pfam Formin Homology 2 Domain 933 1289 IPR015425 -
Tsu04g03723 1303 MobiDBLite consensus disorder prediction 649 935 - -
Tsu04g03723 1303 Gene3D Protein tyrosine phosphatase superfamily 14 204 IPR029021 -
Tsu04g03723 1303 PRINTS Proline rich extensin signature 696 708 - -
Tsu04g03723 1303 PRINTS Proline rich extensin signature 749 770 - -
Tsu04g03723 1303 PRINTS Proline rich extensin signature 710 726 - -
Tsu04g03723 1303 PRINTS Proline rich extensin signature 734 746 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03723 Tsu-Chr4 46231916 46244796 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03723 1 633 FH2 protein (formin) Gene Family AT5G07740 61.562 0.0 767
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03723 - - gmx:100815515 1078.16