Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03697 ATGGAGGATTACTATAACAATACTTTCCTTGAATTTAAGGACCATTTATACCAATCTCTTTCCATTGAATCAAATCAACCTGTATTACCAAACCTGCAAGGTTATACATATCATGCAACTTCTTCAATGGAGGAGCCTAAACCACTTGTGGTTGGGAGCTCAAATTACCATGATAACCAATTTTCTTACAGTGGAGACAATAGTGGACAATATTTCACAATGAATTATTATGATGATGACATTTTTCACTCTTTAGATGCATCTCTCTCTATTGAACCGACACCAAACATGCAACTGCAACTGCAAGacattgattttgatgatgtgaaCGAAGGATTTTTGGGCTGGAATGAAATGTTTCTGAATCTGAATGCTGATGCAGACATTGATTTTGATACTTTCTTTGATTCAGAAAAAGAATATTTATGCTGCACTGATATTGAAATTAAGAAGGAAGTTGTGGAGGTTAAGCCAGAAGTTGAAGATAGAATTAGTAGTAGTTTTGATAATACAAAGAATTTATCAAGAAATGAAATATCTCAGTATTTTTATATGCCAATAAGTCAAGCTGCTAAAGAACTTAACGTTGGCCTTACACTTTTGAAAAAAAGGTGTAGGGAATTAGGTATTCGTAGATGGCCTCACAGGAAACTCATAAGTCTTCAAACCTTGATTAATAATGTTCAGGAAATGGGGAAAAAGGAGGGGCCATTAGGTGATAAAGAGTTAAGGAATGCCATAGAGATGttggaaaaggaaaagaagcTAGTAGAGGAAATGCCAGATATGGAATTGGAACATCGTACAAAAAGGCTTAGACAAGCATGTTTTAAGGCCAACTACAAGAAGAGAAAGCTTATGGAGCAAGAGGAGAAGCTAGTTGTTTTGAGACAATATATGGATagtttgtag 912 0.3344 MEDYYNNTFLEFKDHLYQSLSIESNQPVLPNLQGYTYHATSSMEEPKPLVVGSSNYHDNQFSYSGDNSGQYFTMNYYDDDIFHSLDASLSIEPTPNMQLQLQDIDFDDVNEGFLGWNEMFLNLNADADIDFDTFFDSEKEYLCCTDIEIKKEVVEVKPEVEDRISSSFDNTKNLSRNEISQYFYMPISQAAKELNVGLTLLKKRCRELGIRRWPHRKLISLQTLINNVQEMGKKEGPLGDKELRNAIEMLEKEKKLVEEMPDMELEHRTKRLRQACFKANYKKRKLMEQEEKLVVLRQYMDSL 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03697 303 Coils Coil 240 260 - -
Tsu04g03697 303 ProSiteProfiles RWP-RK domain profile. 156 242 IPR003035 -
Tsu04g03697 303 PANTHER PROTEIN RKD4 76 291 IPR044607 GO:0003700
Tsu04g03697 303 PANTHER PROTEIN RKD1-RELATED 76 291 - -
Tsu04g03697 303 Pfam RWP-RK domain 173 220 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03697 Tsu-Chr4 46047195 46048458 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03697 166 285 AtRKD Transcription Factor Family AT1G18790 65.833 2.46e-52 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Tsu04g03697 RWP-RK 2.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03697 - - cam:101509125 219.164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03697 04 46047195 46048458 Tsu04g03697 04 46047195 46048458 ECH
Tsu04g03697 04 46047195 46048458 Tsu03g01614 03 15982593 15984284 PCT