Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03687 ATGGAGGGAGGAGATGATCtccaccaccatcaccaccaccaccatcagcACCTCCACCTTcagcaacagcagcagcaacaacagcGACAAAATTTCCCATTTCAACTTCttgagaaaaaagaagataatcaAGAAGCAGCATCATGCTCAACTTCATCACCATATCCATCCTTAGCAATTTCACCAATCTCACCAACAGAACCAAGCACATCGAATTCAAACCGATCCAACCAACTAGTATCGGCTTCAGCACCAACAAATTCTGACCCCGGTAACAAAAAACCGCCACCAAAAAGAACCTCCACTAAAGACCGTCATACAAAAGTAGAAGGCCGTGGCCGCCGTATTAGAATGCCGGCACTTTGCGCCGCTCGAGTTTTTCAACTAACACGAGAATTAGGCCATAAATCAGACGGTGAAACAATTGAATGGCTCCTTCAACAAGCCGAACCAGCTGTTATAGCAGCAACTGGTACCGGAACTATTCCTGCTAACTTCACTTCCCTCAACATCTCTCTCCGTAGCTCAGGCTCTTCCATGTCTGTTCCATCTCAGCTTAGATCTTCTTACTTCAACCCAAATTTCTCACTTCAACAACGAAGAACACTTTTTCCTGGAATTGGTTTATCATCTTCAGAtaacagcagcaacaacaacaacacttcAATGCTTCTAAATTTCCAATCAAATAACTTAAACCTAACAACAAACATGTTGCAGGCGAAACAAGAGCTTCGAGAAGGAAACGCGAACGCTAACGCGCCATCTTCATCAACAACGTTGGATTTATCAGAAACAAGTGGAGGAGAAGAATCCATGGgaggaggaagaaagagaagaacTGGAAGTGACCAAGATTTATCATCAATACAACATCAAATGGGAAGTTATTTATTGCAATCAAGTGCAGGTTCGATTCCGGCTAGTCATACTCAGATTCCGGCGAATATATGGATGGTGGCTAATTCTAATAACCAAATAATGAGTGGTGGTGATCCTATTTGGACATTTCCATCGGTGAATAATAGTGCTGCTGCTTTGTATAGAGGAGCAGTTTCAACAAGTGGTTTACATTTTATGAATTTTCCACAACCTATGGCTTTGATGCCAGGTCAGCAATTAGGTAATTCGTCCGGTGGTGGCGGCGGCGGTGGTGGCAGTAATATCAATATGAATATGAACATGAATGAAGGACATTTAAGTATGCTTGCCGGTCTTAGTCCTTATCGTCCGGTTACTGATCACCCTCAatctcatcaacaacaacagcatCAACCAAGTGGATCACAGTCACATCATCGCGGTGGTAGCCACGATGATAGACATGATAATTAA 1335 0.3828 MEGGDDLHHHHHHHHQHLHLQQQQQQQQRQNFPFQLLEKKEDNQEAASCSTSSPYPSLAISPISPTEPSTSNSNRSNQLVSASAPTNSDPGNKKPPPKRTSTKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSSMSVPSQLRSSYFNPNFSLQQRRTLFPGIGLSSSDNSSNNNNTSMLLNFQSNNLNLTTNMLQAKQELREGNANANAPSSSTTLDLSETSGGEESMGGGRKRRTGSDQDLSSIQHQMGSYLLQSSAGSIPASHTQIPANIWMVANSNNQIMSGGDPIWTFPSVNNSAAALYRGAVSTSGLHFMNFPQPMALMPGQQLGNSSGGGGGGGGSNINMNMNMNEGHLSMLAGLSPYRPVTDHPQSHQQQQHQPSGSQSHHRGGSHDDRHDN 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03687 444 MobiDBLite consensus disorder prediction 406 444 - -
Tsu04g03687 444 MobiDBLite consensus disorder prediction 46 95 - -
Tsu04g03687 444 PANTHER TRANSCRIPTION FACTOR TCP14-LIKE 20 443 - -
Tsu04g03687 444 MobiDBLite consensus disorder prediction 249 267 - -
Tsu04g03687 444 MobiDBLite consensus disorder prediction 20 34 - -
Tsu04g03687 444 Pfam TCP family transcription factor 100 241 IPR017887 -
Tsu04g03687 444 MobiDBLite consensus disorder prediction 96 113 - -
Tsu04g03687 444 MobiDBLite consensus disorder prediction 413 432 - -
Tsu04g03687 444 ProSiteProfiles TCP domain profile. 102 156 IPR017887 -
Tsu04g03687 444 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 20 443 IPR005333 GO:0003700
Tsu04g03687 444 MobiDBLite consensus disorder prediction 249 288 - -
Tsu04g03687 444 MobiDBLite consensus disorder prediction 1 113 - -
Tsu04g03687 444 MobiDBLite consensus disorder prediction 374 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03687 Tsu-Chr4 45919102 45921228 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03687 93 398 TCP Transcription Factor Family AT3G47620 46.631 2.58e-65 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Tsu04g03687 TCP 5.5e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03687 - - cam:101512124 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03687 04 45919102 45921228 Tsu04g03687 04 45919102 45921228 ECH
Tsu05g01813 05 19563102 19564791 Tsu04g03687 04 45919102 45921228 PCT