Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03685 ATGATAGTTATGTTTCTTTTGTACTTCGTATGCCATACCGCATTTGACATGTTGCTTGAATTTGactttatgtgtttttttttctccttttcttttggttttctGGTGGTGATCGGGATAGATCTCAATGAGCCGAACAATGGAAAGGCTTCTATATTGTGTGAAGCTTCTAGGCTGCTAAAGGACTTGCTCTGTCAGATTCAGTCCCTCAAGAAGGAGAATGTCTCTTTGTTGTCTGAATCTCATTATGTAACCATGGAGAAAAATGAGCTGAAGGAGGAAAATGGTAGTCTAGAAACTCAAATTGAGAAGCTTCAAGGAGAGATACAGGCAAAAATGGCTCAATCCAAACCTGACCTGAATGTACCTCCTCAATTGGAGTTTGAGCAGCCAGAACTGACAAAATTTCCAGGACATGGTTTCCAAATGCCTACCATAGAACCTACATTACAGCAAGGACCTGCTGTTTTGGTTGTCCCTTTTCGTCCTGATCTTCAAGCTGCTTTTCCAGCTCCTAATGTTACTGAGCTCACGCCAAAACTTGCACCTGTTATCAGTAAACCACATGCCAGGTATCCCACACCAGCAGATTCGTGGCCATCTCAACTGCTTGGAGAGCAACCAACTTCTAATCTGTAg 639 0.4038 MIVMFLLYFVCHTAFDMLLEFDFMCFFFSFSFGFLVVIGIDLNEPNNGKASILCEASRLLKDLLCQIQSLKKENVSLLSESHYVTMEKNELKEENGSLETQIEKLQGEIQAKMAQSKPDLNVPPQLEFEQPELTKFPGHGFQMPTIEPTLQQGPAVLVVPFRPDLQAAFPAPNVTELTPKLAPVISKPHARYPTPADSWPSQLLGEQPTSNL 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03685 212 Coils Coil 60 80 - -
Tsu04g03685 212 MobiDBLite consensus disorder prediction 188 212 - -
Tsu04g03685 212 PANTHER TRANSCRIPTION FACTOR BHLH47 40 210 - -
Tsu04g03685 212 Coils Coil 88 115 - -
Tsu04g03685 212 PANTHER TRANSCRIPTION FACTOR BHLH47 40 210 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03685 40 207 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47640 48.404 3.25e-45 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03685 - - mtr:MTR_4g108360 290.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03685 04 45888692 45891527 Tsu04g03685 04 45888692 45891527 ECH