Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03671 ATGGGTAAATCACCTGGAAAATGGATCAAAACTGTACTGTTCGGGAAGAAATCATCCAAATCAAATATACCAAGAGGAAGAGAGAAGCTTGTTAATCAAAAAGAAGGAGTTGTTGCTTCCAAGGTTTCAGAAACTGGTTTAGCTTTAGAGCCAACCACCAATACTATTCCAAGACATGAGGAAGACTTGGAGCTGGAGAATAAAGAAGCAGAAAATGTTTTTCCTGGGAATCAAGAAATTGACACAGTGGAACCTGTTAATCAAGATGCTCCAATTGATCCAGAGACATTGAAGCTGGAGGAAGCAGCCACGAAAGCTCAGGCTGCTTTCAGGGGTTATTTGGCTCGGCGAGCTTTTAGAGCCCTAAAAGGCATAATAAGGTTACAAGCACTTATTCGAGGACACTTGGTTAGAAGACAAGCTGTTGTTACATTATGCTGTATGTATGGAATTGTCAAACTACAAGCACTTGGTCGTGGACAAAGTGTTAGAAAGTCTGATGTCGGATTTGAAGTTCAAGAGAAGTGCATTCTATTGAAGTTTCAGGATGACAAACCTGGCAAACCTATTACATTATCTGGTAAAATTATGAAGCTGTCAGCAAATACTTTCATTCGTAAGCTTATTGCTTCATCAACTACAATAATGGCCCTGCGTTTGCAATATGTTCCTGGTGATCCAAATTCAGTCCTAAGTTGGTTGGAGCGTTGGTCAGCATCTTGGTTTTGGAAGCCAATTCCTCAACCCAAGAAAATTCGGGATACAAAGCCTCATAAAAAGCAGGGTAACATTTCAACTGGAGATGCTCAAACGAGCAAATCAAAGCGTACACACAGGAAACTTCCTACTGCAAATCTTGACCTAGCCCCATCTCAAGCAAATCCTGAAATTGAAAAACCAAAACGAAATGTAAGGAAATTTCCAAGCCAACCCTCGGATCCTGTCTTGGAAAATCCCCAGATCGAGCTTGAGAAGGTTAAACGTAACTTGAGAAAGGTTCATAACCCAGTTGTTGAGACCACAATTCTGTCAGAAGTTGAATCTGAGACTCTAAAGCCGAATGTGGAAAAGGAAACAGTTGCCTCCAGTGTTGATATATCGGATCCTGCGATCATTAGTTCTAATGGAAAGATTAAGAAGGAAGCAACACTAAGCATTTCCAGGGAGCCAGATATCGGAATTACTCATGGAGATTTAATTACTAAGGAGGTGTTTGACACTCCAAGCAGTTATCAGGTGAATGTGGAATCAAAGCCCTTGACAGATATTACAAGCAAAGATAAAAACATTTCTGACGATGAAGTAAAAAATGAGCCTATAGATTTAGTAGAGACTATTGGCAAAGATGAAAATTCTCACTTAACAAATGGAGGTTTGAGTCACAAGGAAGATCAAGCGGGCAGTGAAAATCAGAAACCAACCCGAAAAGCCTCAATTGTAGCTAAGCAGGAACGTGCAGAGAATGGTTTGCACAGTGGTCCGTCAATACCTAGTTATATGGCAGCAACTGAATCTGCAAAGGCAAAATTGAGGGCTCAAGGATCACCAAAAATTGGACAAGAAGGAAGCGAGAAAAACAACAATGCTCGGCGACAGTCTCTGCCATCTTCAACTAACAGCAAAATCAGTTCGCATTCACCTAAAATACAGAGACCAACTCAATCAGGTGGTAAGGTGGGCCATAAAAGTGACAAAGCTGTATCATCTTCTAAAGATGGAAATGCGAAGGTAATTCAAGCAGAATGGAAGAGATGA 1755 0.408 MGKSPGKWIKTVLFGKKSSKSNIPRGREKLVNQKEGVVASKVSETGLALEPTTNTIPRHEEDLELENKEAENVFPGNQEIDTVEPVNQDAPIDPETLKLEEAATKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVVTLCCMYGIVKLQALGRGQSVRKSDVGFEVQEKCILLKFQDDKPGKPITLSGKIMKLSANTFIRKLIASSTTIMALRLQYVPGDPNSVLSWLERWSASWFWKPIPQPKKIRDTKPHKKQGNISTGDAQTSKSKRTHRKLPTANLDLAPSQANPEIEKPKRNVRKFPSQPSDPVLENPQIELEKVKRNLRKVHNPVVETTILSEVESETLKPNVEKETVASSVDISDPAIISSNGKIKKEATLSISREPDIGITHGDLITKEVFDTPSSYQVNVESKPLTDITSKDKNISDDEVKNEPIDLVETIGKDENSHLTNGGLSHKEDQAGSENQKPTRKASIVAKQERAENGLHSGPSIPSYMAATESAKAKLRAQGSPKIGQEGSEKNNNARRQSLPSSTNSKISSHSPKIQRPTQSGGKVGHKSDKAVSSSKDGNAKVIQAEWKR 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03671 584 ProSiteProfiles IQ motif profile. 99 127 IPR000048 GO:0005515
Tsu04g03671 584 Pfam Protein of unknown function (DUF4005) 483 563 IPR025064 -
Tsu04g03671 584 SMART iq_5 98 120 IPR000048 GO:0005515
Tsu04g03671 584 SMART iq_5 121 142 IPR000048 GO:0005515
Tsu04g03671 584 MobiDBLite consensus disorder prediction 447 584 - -
Tsu04g03671 584 MobiDBLite consensus disorder prediction 248 316 - -
Tsu04g03671 584 Pfam IQ calmodulin-binding motif 101 120 IPR000048 GO:0005515
Tsu04g03671 584 Pfam IQ calmodulin-binding motif 123 140 IPR000048 GO:0005515
Tsu04g03671 584 ProSiteProfiles IQ motif profile. 123 145 IPR000048 GO:0005515
Tsu04g03671 584 Gene3D - 96 145 - -
Tsu04g03671 584 PANTHER IQ-DOMAIN 5-RELATED 1 571 - -
Tsu04g03671 584 PANTHER PROTEIN IQ-DOMAIN 31 1 571 - -
Tsu04g03671 584 MobiDBLite consensus disorder prediction 449 464 - -
Tsu04g03671 584 MobiDBLite consensus disorder prediction 519 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03671 Tsu-Chr4 45745724 45754743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03671 1 584 IQD Protein Family AT1G74690 44.571 1.01e-128 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03671 - - gmx:100807118 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01759 05 18187419 18193141 Tsu04g03671 04 45745724 45754743 ECH
Tsu04g03671 04 45745724 45754743 Tsu04g03671 04 45745724 45754743 ECH
Tsu05g01759 05 18187419 18193141 Tsu04g03671 04 45745724 45754743 PCT