Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03667 ATGTTCAATCATTTCCTTACCAGAGCTTCAAGGGTTTCATCTCTTACCAAACACAATCTTCTTCCTGCTTTCAGGTCTGCCCATTCAATACCACTTGCCACAGTAGAAGCAGAAGAGATTTCTGGTGCAAAGCCTGCTGAAGTTTTGAACTTGGTACAGGGTAAATGGATTGGATCATCAAACTGGAATACAGTTGTGGATCCTTTAAATGGGGAGCCATTTATTAAAGTTGCTGAAGTTGATGAAGCAGGCGTTCAGCCTTTTGTTGATAGCTTGACTAGCTGTCCCAAACATGGTTTGCACAATCCTTTTAAGGCACCAGAGAGATATCTTATGTATGGAGACATATCTGCTAAGGCAGCTCACATGCTCTCACTTCCTAAGGTTTCAGATTTCTTTGTAAGGCTAATACAAAGAGTTTCTCCAAAGAGTTATCAGCAGGCTTTTGCAGAAGTTTATGTGACACAAAAGTTTCTAGAGAACTTCTGCGGAGATCAGGTCCGTTTCTTGGCTAGGTCTTTTGCAGTACCTGGAAATCATCTTGGGCAGCAAAGTCATGGCTTCCGTTGGCCATATGGTCCGGTGGCAATTATTACTCCTTTTAATTTTCCCCTAGAGATTCCAGTCCTTCAATTAATGGGTGCACTTTATATGGGCAACAAGCCAGTCCTCAAAGTCGATAGCAAGGTGAGCATTGTTATGGAACAAATGTTGCGCCTTCTTCATGCCTGTGGCTTACCTGTAGAAGATGTAGACTTCATAAATTGTGATGGAAAGACAATGAACAAGCTACTGCTAGagGCAAATCCAAGAATGACCCTTTTCACTGGTAGTTCAAGAGTGGCAGAGAAGTTGGCTGTCGATTTGAAGGGCCGTGTTAAATTAGAAGATGCTGGATTTGACTGGAAAATATTGGGCCCTGATGTCCATCAGGAAGATTACACTGCATGGGTATGTGACCAGGATGCATATGCATGCAGCGGTCAGAAGTGTTCAGCACAATCATTGTTATTTATGCACGAGAACTGGTCTAAGACTTCCTTGATATCTAAGTTGAAAGAACTTGCTGAGAGAAGAAAGCTAGCAGACTTGACAATTGGCCCAGTCCTTACTTTTACAACTGAATCATTGCTTGAGCACACAAAAAATTTACTTGAGATACCAGGATCGAAGCTGCTCTTTGGGGGTCAGCCTTTGGAGGACCATTCGATTCCGGAAGTTTATGGTGCTATTAAACCAACTGCAGTTTATGTTCCCCTAGAAGAAATTGTGAAGGATAAGAATTATGACCTCGTGacaaaagaaatatttggaCCTTTCCAGgtTATTACTGACTACAAAAGCAGTCAACTACCAATTGTGTTGGAGATTTTGGAAAAAATGCATGCACACCTAACTGCCGCCGTAGTTTCAAATGATCCTTTATTTTTACAAGAAGTGATTGGGAAATCAGTAAATGGTACCACTTATGCAGGTCTAAGAGCAAGAACAACTGGAGCTCCACAAAACCACTGGTTTGGACCAGCCGGTGACCCCAGGGGTGCAGGAATCGGAACACCAGAGGCTATAAAACTTGTATGGTCTTGCCACAGAGAAATAATTTATGATTATGGACCAGTATCAAACGATTGGAAAATTCCTCCTTCAACATGA 1653 0.4168 MFNHFLTRASRVSSLTKHNLLPAFRSAHSIPLATVEAEEISGAKPAEVLNLVQGKWIGSSNWNTVVDPLNGEPFIKVAEVDEAGVQPFVDSLTSCPKHGLHNPFKAPERYLMYGDISAKAAHMLSLPKVSDFFVRLIQRVSPKSYQQAFAEVYVTQKFLENFCGDQVRFLARSFAVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQMLRLLHACGLPVEDVDFINCDGKTMNKLLLEANPRMTLFTGSSRVAEKLAVDLKGRVKLEDAGFDWKILGPDVHQEDYTAWVCDQDAYACSGQKCSAQSLLFMHENWSKTSLISKLKELAERRKLADLTIGPVLTFTTESLLEHTKNLLEIPGSKLLFGGQPLEDHSIPEVYGAIKPTAVYVPLEEIVKDKNYDLVTKEIFGPFQVITDYKSSQLPIVLEILEKMHAHLTAAVVSNDPLFLQEVIGKSVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYDYGPVSNDWKIPPST 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03667 550 CDD ALDH_F12_P5CDH 50 538 - -
Tsu04g03667 550 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 324 335 IPR016160 GO:0016491
Tsu04g03667 550 SUPERFAMILY ALDH-like 50 517 IPR016161 GO:0016491
Tsu04g03667 550 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 302 491 IPR016163 GO:0016620
Tsu04g03667 550 PANTHER ALDEHYDE/HISTIDINOL DEHYDROGENASE-RELATED 24 549 - -
Tsu04g03667 550 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 24 549 IPR044638 GO:0004029
Tsu04g03667 550 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 41 301 IPR016162 GO:0016491
Tsu04g03667 550 Pfam Aldehyde dehydrogenase family 63 491 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03667 Tsu-Chr4 45701970 45709062 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03667 1 550 Aldehyde Dehydrogenase Gene Family AT5G62530 80.755 0.0 960
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03667 K00294 - gmx:100806579 995.342
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03667 04 45701970 45709062 Tsu04g03667 04 45701970 45709062 ECH