Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03639 ATGGGACACAAAAAGCGAAACTCTGTTCCACGTTCCAAACTATCGCCGGCGGCTTCTCCGGTGGCTCAATCCCCCATCGGCGGAGCCGCCAATGGTTCTACTTCACCCGACGCCGATTCCATCATTCTCTTCGATCAAAATCTCACTAACCCTAGCAAGATCGAATTAGTTTCTCATCAATCTGAGGGTTCCGATTTCTCTGCAATTAAGGTAGAATGTGAGAGAGCCCTAACCACGTTTCGTCGTGGGAATCATAATAGAGCAATGAAGCTTATGAAGGAGTTGTGCTTGAAGGAGGATGGTTCTCTGTACTCGGCTTTCGTTTATCGAATTCATGGGTTTATATGTTTCAAAGTGGCTTCGATTATTACTGATTGTAGTGCGAAACAGCGGCATTTGAAGCATGCTGTTGAATCGGCGCGGAGAGCTGTTGAGCTTTCGCCGAATTCGATTGAGTATGCACATTTTCATGCCACTGTGATGTTGGAAGCAGCCACTGAGGGGAAGGATTATGAGGATGTGGTGCACGAGTGTGAGAGAGGGCTTGCTATTGAAAACCCAAATGATCCTGCTAAGGAGACATTGCAGGATGAGAGCGAGCAGAAAGTGTCTAGTTTGGAAGATCGGATATTACATGTTCAGGCTGAGTTGAGGCAGCTGATTCAGAAGTCAAACATAGCTTCATTGTCGTCTTGGATGAAAAATTTGAGTAATGGGGAAGAGAGGTTTCGGTTGATTCCTATAAGGAGGGCTACGGAGGATCCTATGGAGGTTAGGTTGGTTCAGACTAGAAGGCCAAATGAGATTAAGAAGGTGACCAAAACTCCCgaggaaagaagaaaagagatcgAAGTAAGGGTAGCTGCTGCTAGGCTGTTGCAGCAGCAGTCGGAGTCACCCCAGTCCCCGAATGAAGGAGATAGGGATGACAGAGCGTTGGATGTGTCTTCAGGGTCTAGTCAGAGGGTAGGTGAGAGGCGAAGGCATGTGAGAAACAACGGCTCTTCAGCCGAAAGGAGAAAGTGGGTTCTAACTTATTGGGATTCACTGAGTATGGATGTAAAGAAGGACTGGCTTAGGATTAAAATATCTGATATGATGTCCCACTTTGGCTCAACAAAGGATACTTTGCCGAAAGATGTTTTATCAGAAGCTCTGTTTTATGCTGAAGCCAATAAAACATGGAAATTTTGGAATTGCGGCATTTGTGCTGAGAAATTTCCCAACCAGGAATTTCATAGGCAGCATGTTATGCATGTGCACCTTCAGACTCTCTCGCCAAAAATGCAGAGACTTTTGCCTCAACATGTTGACAGTGAATGGATTGAGATGATTCTTAATTGTTCTTGGAAGCCTTTGGATGTCTCAGCTGCAGTTAAAATGATTGACTATAAAGCAAAACTGAAAGGTCCATCACTTCCAGAGGATTATCTTACTCAGGACTACAATGATTGTTTTAAAGATTCAAGCAGCTCTTACCACGAAAAGGAAAGTTTAGGGTACAATATTGGTAATTGTACGACCGAAAGCATTAAGTATTATAAAAATGCTGAAAGTGATGCCAAAGAAGTCATTGAAGACCAACAGTTTATGGCAAATCCCGTTACTGATTGTTGGCCAGTATCTGATGACAAGGAGCGTGCAAAACTTCTAGAGAAAATCCATGGAGTATTTGAGATACTTATTAGACACAAATGTCTTGCTGCTAGTCATCTTCACAAAGTCATACAATTTAGTATGGGTGAGATCCAGGGTCTTGCTGCTGGTTCTGAACTTCTAAAACATGATGTAGACCAAACACCATTGTGTATATGCTTTCTGGGAGCTTCACAACTTAAAAAAATTCTCCAGTTTCTGCAGGAAATGTCTCATGCTTGTGGGTTGGGTAGATATTCTGATAAAAGTAGTAGTCCTAAGAATGATTTGCATGATATTAGTCAAGGTCctgaaattaaagataaaattgttcTCAATGGAGATGCGTCATGCCTTCTCCTGGATGAGTGTCTACTGCCTACACAAGTCACTCCTGGTACAGCCCAGGAGGCTGTCTTCGAGGACATGGTCACCCCAAGTTCTCCTGATGGAATTTCAGACAATAGTTGGCTGTCCTGGCTATATTCAAGTCGGCCTATTGGGGATCAGTTGACGTCATGGATTCGGACCAAAGAAGATAAAACATGTCAAGGACAAGAAATGGTCCGGACACTTGACAAGGAATTTTATCAATTACATAGCCTGTGCCAGAAGAAGTGTGACCGTATAAGTTATGAGGAAGCACTGCAGACAATAGAGGATCTTTGTCTTGAAGAAGGTAAGAAGAGGGAAAATGTGGGAGAATTTGTGCAGCGAAGCTATGAGTCTGTCTTAAAAAGGCGCAGAGAAGAGCTTGCTGAGAGTGAGAATGAAATGATGTATGCTGGCAATAGGTTTGAGATGGATTGTATATCAAATGTTTTGCAAGAAGCAGAAGCGATGAATGTTAATCAATTTGGCTATGAGGAAACTTATAATGGTGTGACTTCTCAGTTATGTGACTTGGAATCCGGTGAAGATGATGAATGGAGAATGAAGGACTGCTTGCACCAAATGGATGGCTGTATCGAAATTGCTATTCAGAAACTTAAAGAGCACTCGTCTATAGAGATTAGCAAAGTCGATGCtgaaataattaaatgtgtTTCAGAGGTGCAGCAATTGGAACACAAGCTTGGGCACATTTCTGCTAATGATTATCGAGCAATAATAGTGCCTCTAGTGAAGTCGTACCTAAAGACACTTTTGGAAGATTTGGCTGAGAAAGATGCAAGGGAGAAATCTGATGCTGCAGGTGAAGCATTTTTGGCTGAACTTGCTCTTGATTCCAAGAAGATTAGCAAAGGGGGAAATGAGAACACAAGAAATGTGGAGAAGACAAAAgataagaagaagaataaaGATCACAGGAAAACAAGAGATTTGAAGGCCACAAGTGGTTCTATGCATCCCTTGCTTCAGTCTACAACTCTTGATTCTGATCTGGTATCACCTGATAGTGACTTTCAAGATCACGAGGTTGTTTCtatgaatgatgatgatttggaacACCACGAAGAGGAATTTAGACGTAAAATTGAGCTTGAAGAGGAGGAAAAAAAGCTTGAAGAAACCTTGGAACTTCAACGGAGGATTGAAAATGAGGCCAAACAGAAGCACCTTGCTGAGCAACAGAAGAAATTATCTGGTACTTGTGTAGAGGAAGTGACAGATAAACTTCAAGATTGTCAATTGAAGCCTGTTGCCGATGGTTCAGATGCACAAGAACATGGAAGACTACCTATGCAGGAACAGTTGGCAAAGGAGAATGGGTGCCCAAATAATCTGGATGTTGTGCTTATTACCACATCAAATGGTTCCATGATGCCGATTAAATATTCAGCTGATTCAGATTCCCCAAAAATCAATCATTTGCATCAGTCAAAAGTTAAACAAGCAGATACACCCAATGGAATTGTTCCAGAGAATGGTCTACCTTTGCCTGATCGACGTGCTGGAAAAAAACATAAGCGGAATAAGAATTCGTCTAAAATGGCTGATGGAAAGTTGGAATATGTTTCATTGGAGAATGAGAATATCGAGGATACACACAATGACTATCACTTGAGAGAGCAGTCTAAATTTCATAACAATCAAGATGCTAAACACTTGTTGGAAAACAATGGAGCAAAGGTGATGAAAGAATTGCCAGTACAAGATGAGGAGGAGGAAAGATTCCAAGCTGATCTTAAAATGGCTGTACGCCAAAGCCTAGACACGTATCAAGCACGTGGAAATTTGCCGTTGGCTTCAAGTATGAGAATACCACAGAGATCTTCCTCCCAAGTAGACCAATTTGGTACTGCACCTTTGGAAGATTCAACTCAGGATGTAAATGGAGCTAGTTTACTTGGTACGGGACTGAGGAATGAAGTGGGTGAATATAATTGTTTTCTCAATGTTATTATTCAGTCATTGTGGCATTTAAGACGCTTTCGGGTGGAATTTCTTGCCAGATCAAGATCAGAGCATGATCATGTGGGTAATCCCTGTGTTGTCTGTGCCTTGTATGAAATATTTACTGCTCTAGACCTTGCTTCAAAGGATTCAAGAAGAGAAGCAGTTGCACCTACTTCCCTGCGGATAGCTCTAAGCAACCTATATCCACATAGTAACTTCTTCCAGGAGGCTCAGATGAATGATGCTTCTGAGGTACTGGCGGTGATATTTGACTGCCTTCATCGATCATTTACTCGTGGTTCAGGTGTTTCTGCTGCAAAAACAGTGGAAAGCAAGTGCATGGGGTCTTGGGATTGTGCAGCTGGTAGTTGTATAGCACATTCACTTTTTGGAATGGacatttttgaacaaatgaaCTGCGACCACTGTGGTCTTGAGTCCAGACATTTGAAGTATACTTCCTTCTTTCACAATATAAATGCCAATGCCCTCAGGACAATGAAGGCTACGTTTCCCGAAAGCTCCCTTGACAAGCTTTTGAATCTTGTGGAGAGGAATCATCAATTGGCTTGTGATCTAGAAGTTGGTGGCTGTGGCAAGCTCAACCACATCCATCACTTTCTTTCAACCCCACCCCATGTTTTTATGACAGTTCTAGGTTGGCAAAATACATGTGAGAGTGCTGATGATATAACTGCAACTCTGGCAGCCTTGAGCACCAAGATAAATATCAGTGTCCTTTATCGCGGTTTAGATCCTAAAAGCACCCATAACTTGGTTTCGGTGGTTTGCTACTATGGCCAGCATTATCATTGCTTTGCTTATAGTCATGACCACGGCCAATGGATTATGTATGATGACAAGACTGTTAAGATAATTGGTGGATGGGCTGATGTTCTGACTATGTGTGAGAGAGGGCATCTACAGCCTCAGGTTCTCTTCTTCGAAGCTGTAAACTATATTTCTGGTGGGAACTCATAA 4956 0.4151 MGHKKRNSVPRSKLSPAASPVAQSPIGGAANGSTSPDADSIILFDQNLTNPSKIELVSHQSEGSDFSAIKVECERALTTFRRGNHNRAMKLMKELCLKEDGSLYSAFVYRIHGFICFKVASIITDCSAKQRHLKHAVESARRAVELSPNSIEYAHFHATVMLEAATEGKDYEDVVHECERGLAIENPNDPAKETLQDESEQKVSSLEDRILHVQAELRQLIQKSNIASLSSWMKNLSNGEERFRLIPIRRATEDPMEVRLVQTRRPNEIKKVTKTPEERRKEIEVRVAAARLLQQQSESPQSPNEGDRDDRALDVSSGSSQRVGERRRHVRNNGSSAERRKWVLTYWDSLSMDVKKDWLRIKISDMMSHFGSTKDTLPKDVLSEALFYAEANKTWKFWNCGICAEKFPNQEFHRQHVMHVHLQTLSPKMQRLLPQHVDSEWIEMILNCSWKPLDVSAAVKMIDYKAKLKGPSLPEDYLTQDYNDCFKDSSSSYHEKESLGYNIGNCTTESIKYYKNAESDAKEVIEDQQFMANPVTDCWPVSDDKERAKLLEKIHGVFEILIRHKCLAASHLHKVIQFSMGEIQGLAAGSELLKHDVDQTPLCICFLGASQLKKILQFLQEMSHACGLGRYSDKSSSPKNDLHDISQGPEIKDKIVLNGDASCLLLDECLLPTQVTPGTAQEAVFEDMVTPSSPDGISDNSWLSWLYSSRPIGDQLTSWIRTKEDKTCQGQEMVRTLDKEFYQLHSLCQKKCDRISYEEALQTIEDLCLEEGKKRENVGEFVQRSYESVLKRRREELAESENEMMYAGNRFEMDCISNVLQEAEAMNVNQFGYEETYNGVTSQLCDLESGEDDEWRMKDCLHQMDGCIEIAIQKLKEHSSIEISKVDAEIIKCVSEVQQLEHKLGHISANDYRAIIVPLVKSYLKTLLEDLAEKDAREKSDAAGEAFLAELALDSKKISKGGNENTRNVEKTKDKKKNKDHRKTRDLKATSGSMHPLLQSTTLDSDLVSPDSDFQDHEVVSMNDDDLEHHEEEFRRKIELEEEEKKLEETLELQRRIENEAKQKHLAEQQKKLSGTCVEEVTDKLQDCQLKPVADGSDAQEHGRLPMQEQLAKENGCPNNLDVVLITTSNGSMMPIKYSADSDSPKINHLHQSKVKQADTPNGIVPENGLPLPDRRAGKKHKRNKNSSKMADGKLEYVSLENENIEDTHNDYHLREQSKFHNNQDAKHLLENNGAKVMKELPVQDEEEERFQADLKMAVRQSLDTYQARGNLPLASSMRIPQRSSSQVDQFGTAPLEDSTQDVNGASLLGTGLRNEVGEYNCFLNVIIQSLWHLRRFRVEFLARSRSEHDHVGNPCVVCALYEIFTALDLASKDSRREAVAPTSLRIALSNLYPHSNFFQEAQMNDASEVLAVIFDCLHRSFTRGSGVSAAKTVESKCMGSWDCAAGSCIAHSLFGMDIFEQMNCDHCGLESRHLKYTSFFHNINANALRTMKATFPESSLDKLLNLVERNHQLACDLEVGGCGKLNHIHHFLSTPPHVFMTVLGWQNTCESADDITATLAALSTKINISVLYRGLDPKSTHNLVSVVCYYGQHYHCFAYSHDHGQWIMYDDKTVKIIGGWADVLTMCERGHLQPQVLFFEAVNYISGGNS 1651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03639 1651 MobiDBLite consensus disorder prediction 993 1009 - -
Tsu04g03639 1651 MobiDBLite consensus disorder prediction 1159 1188 - -
Tsu04g03639 1651 MobiDBLite consensus disorder prediction 959 1013 - -
Tsu04g03639 1651 Gene3D Cysteine proteinases 1297 1642 - -
Tsu04g03639 1651 MobiDBLite consensus disorder prediction 960 975 - -
Tsu04g03639 1651 Coils Coil 1030 1070 - -
Tsu04g03639 1651 Pfam Protein of unknown function (DUF629) 345 869 IPR006865 -
Tsu04g03639 1651 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1644 - -
Tsu04g03639 1651 MobiDBLite consensus disorder prediction 292 334 - -
Tsu04g03639 1651 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1311 1643 IPR028889 -
Tsu04g03639 1651 Pfam Ubiquitin carboxyl-terminal hydrolase 1312 1619 IPR001394 GO:0004843|GO:0016579
Tsu04g03639 1651 Coils Coil 783 803 - -
Tsu04g03639 1651 MobiDBLite consensus disorder prediction 303 334 - -
Tsu04g03639 1651 PANTHER INACTIVE UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 53-LIKE 1 1644 - -
Tsu04g03639 1651 ProSitePatterns Zinc finger C2H2 type domain signature. 400 421 IPR013087 -
Tsu04g03639 1651 CDD Peptidase_C19 1402 1641 - -
Tsu04g03639 1651 SUPERFAMILY Cysteine proteinases 1311 1641 IPR038765 -
Tsu04g03639 1651 Pfam Protein of unknown function (DUF627) 75 186 IPR006866 -
Tsu04g03639 1651 MobiDBLite consensus disorder prediction 1 34 - -
Tsu04g03639 1651 Coils Coil 196 223 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03639 65 1641 C2H2 Transcription Factor Family AT3G47890 53.383 0.0 1613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03639 - - gmx:100799759 2420.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03639 04 45457363 45468713 Tsu04g03639 04 45457363 45468713 ECH