Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03638 ATGACCCTTAAGGGTGGTACAACACAGGCTTGTGCAGCATGCAAATTCCAGAGAAGAAAATGCACACCTGAGTGCCTTTTAGCTCCATATTTCCCTGCAGACCAACCCAAAATATTTCTCAATGTCCACAAACTATTTGGAGTTAGCAACATTgtcaaaatactaaaatatttgGAACCTAGTCAGAAAAAAGTAGCCATGGACTCTATTATCATTCAAGCTAATTATAGAGATAAGTATCCTGTACATGGATGTTGGGAGGAAATTTGCAGGTTACAATATCAAATATGGATGATGGAAGAAGAACTTCATGTTGTTTATCAACAGCTTGAAATTTGCaggcaacaacaacaacaacaacaacagttACCTCATGATGATGTGACTTCACAGTTAGAATTGGGAATGGCGCCGCGTTCGTCTAACGCACTCGCACTCTTTAATCAAACTCCGCAACCACAGagttataatattaataacaataatacaGTGGCTGCTCCTTTGTCTGTATCTCAGCAACATTCCTACTCCAACAGCAATAGTGTGGATTATAATAACTCACCCCTCTACATGGATTCGAAGGATAATGCAACAAATCCTAATTTGTGGATTCAGTGCCCTTACACAAGTAACAATAGCAATTCAATAACAATGCAACCTCATCAGTTGATTGCCTCAGAGTCGCAACCACTGTCATCTGTCCAACAAGGAGTTGTTGAAGATAATTATGATGAAATGCATTCATTTTTTGATACAGTTGATGATAGGCAATCATACATTTATTCTAAGGAGGCTTATGAATCAAGTTCGGAAGAATCACTGAAAGATACAAGAAAGTGCACGGAGCATGTTTCTGAGAATGAACTGAAGAATGCAGCTGCTTGTTTCAGCCTTACCAGTGTCAATTGA 909 0.3652 MTLKGGTTQACAACKFQRRKCTPECLLAPYFPADQPKIFLNVHKLFGVSNIVKILKYLEPSQKKVAMDSIIIQANYRDKYPVHGCWEEICRLQYQIWMMEEELHVVYQQLEICRQQQQQQQQLPHDDVTSQLELGMAPRSSNALALFNQTPQPQSYNINNNNTVAAPLSVSQQHSYSNSNSVDYNNSPLYMDSKDNATNPNLWIQCPYTSNNSNSITMQPHQLIASESQPLSSVQQGVVEDNYDEMHSFFDTVDDRQSYIYSKEAYESSSEESLKDTRKCTEHVSENELKNAAACFSLTSVN 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03638 302 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Tsu04g03638 302 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 7 250 - -
Tsu04g03638 302 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
Tsu04g03638 302 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 7 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03638 Tsu-Chr4 45453864 45455040 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03638 1 265 AS2 family AT3G47870 38.816 6.38e-52 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Tsu04g03638 LOB 6e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03638 - - lang:109357116 384.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03638 04 45453864 45455040 Tsu04g03638 04 45453864 45455040 ECH