Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03628 ATGGCATATAGACGTTGCCTCTTGCAAAGAGGAAACAACCTCATAGATCGGAAATGCCACCCTTCGTTCACCTATATTCTCCATTCCGACGAAACCAAACGCGACCGTTCAGATGAGAAGAATTCAACGTCTTCACAAGGAATCACTAACAATACCTTTATCCAATCAAGCTCCTTTGGAACCTCTCTTAATGGATCAATGGGTTTTTCTCCATTCGCGGGATATAATTTCTGCAGAAACATGTCCACATTCAATCGTGATGATTCAGATAAGATTAGCGTAATGAGTGATGTAGCTGATGTTCTCACTGATACTTCCTTGGATGCTGGTATTCTCACTGAGACTGTTGTGGATGCTGCTGTGTCATCTCAGGCTCCGGTTGTTAGTGAAGTTGCCATTGCTGCCGCTGATTCTTATTTGCCTGTACAAGCCTTGCAGTATGCCATTGATGCTGTTCATTCCTTCACTGGGTTAAACTGGTGGGCGGCCATAGTTCTAACAACTCTCTTGATTCGAACTGCAACTGTTCCACTTTTAATAAATCAACTCAAGGCCACTTCTAAGCTTACGCTTATGAGGCCTCATTTGGAAGCGATAAAGGAAGAGATGGATGGGAAGACATTTGATCCCGAGGCTGTTGCTGAAGGTCAGAAGCGGATGAAAAGGCTATTCAAAGAGTATGGTGTGAGTCCTTTAACGCCATTGAAGGGACTCTTCATTCAAGGTCCCGTCTTCATTAGTTTTTTTCTTGCGATATCAAACATGGCTGAAAAAATGCCCTCATTCAAGCATGGTGGAGCTTTCTGGTTTACTGATCTCTCATCTCCAGATGCCTTATACATTTTTCCAGTTTTGACTGCATTGTCATTCTTAATAGTAGTAGAGtgTAATGTGCAAGAAGGAATGGAAGGAAATCCTATGGGTGATACCATGAAAAAATTCTCGAGGATTCTTGCTTTTGTTTCAGTTCCTCTCACCATGGGTTTTCCAAAGGCAATATTTTGTTACTGGATTACATCGAATGTGTTTTCTCTGGCATATGGAACGGTGCTTAAAGTTCCTGGTGTAAAGAAAACTTTGGGTATTCCTGAATTACCTGCAGCACCCACCAGTTCTCCAAAATCTCCCTTCTCTATTTTTCCAGCACTAAAACAACCTGCATCAGCTGAAGATAGTCAAAGTCCATCGCCAGTTGAATCATCAAAACGACCAAATAAAAAGACATCTTCTTCTGCTATTATTAGTCAAAGGCTAAGAACCTTAGAGAAACAAATGAAAATTATGCACGGGTACTCATCTGAGAGAGTACCGGTACTTGGTCAATTGATAACAAAGACCCAACCGGCTCATCGCACCGTCCTTTCCGCCGCCGTCAACCGATTCGTCGATTCCTCTCTTCCTAGGTTTCACTTTTCTTCCGTAGCTTCCAAGAAAAAGCCATCCTCCGACGAGAATCTTCTCCGTGTCATCGAATCAGAAATCACTTGTGCTAAAGAAACCGATGATTACGGCGCTGGTGAAGAGGTACCAAGTAATTTTCCATTTAAGATAATTGATAGTGCAGGAGAACAAATAATAACACTTGAAAGAACTTATGAAGGTGAAGAAATTAAGGTTGAAGTTCACATGCCTGATTTGGTTACTGGTGAAGAACATGATCGCGATGATGAGAATGATGATAAGGATGATGAGAATGAGAGAGCAAATCAATCAAGTATTCCACTTGTAGTTAATGTTTATAAGAAGGGTGGACCGTCTTTGGAGTTTAGTTGCGTCGCTTACCCTGATGAGATTGTTATTGATAGCTTATCTGTTAAGAATCCTGATGTTTCTGATGATCAAATTCCTTACGAAGGACCAAGTTTTCAGGATTTGAACGAGAGCCTGCAAAAGAAATTCCACAAGTACTTGGAAATTAGGGGAATAAAACCTAGCTCGGTAAATTTCTTGCATGAGTACATGATCAACAAAGATAGTAGAGAATACTTGGTGTGGTTAAGTAAGCTCAAGAGTTTCATTCAAGCATGA 2028 0.4107 MAYRRCLLQRGNNLIDRKCHPSFTYILHSDETKRDRSDEKNSTSSQGITNNTFIQSSSFGTSLNGSMGFSPFAGYNFCRNMSTFNRDDSDKISVMSDVADVLTDTSLDAGILTETVVDAAVSSQAPVVSEVAIAAADSYLPVQALQYAIDAVHSFTGLNWWAAIVLTTLLIRTATVPLLINQLKATSKLTLMRPHLEAIKEEMDGKTFDPEAVAEGQKRMKRLFKEYGVSPLTPLKGLFIQGPVFISFFLAISNMAEKMPSFKHGGAFWFTDLSSPDALYIFPVLTALSFLIVVECNVQEGMEGNPMGDTMKKFSRILAFVSVPLTMGFPKAIFCYWITSNVFSLAYGTVLKVPGVKKTLGIPELPAAPTSSPKSPFSIFPALKQPASAEDSQSPSPVESSKRPNKKTSSSAIISQRLRTLEKQMKIMHGYSSERVPVLGQLITKTQPAHRTVLSAAVNRFVDSSLPRFHFSSVASKKKPSSDENLLRVIESEITCAKETDDYGAGEEVPSNFPFKIIDSAGEQIITLERTYEGEEIKVEVHMPDLVTGEEHDRDDENDDKDDENERANQSSIPLVVNVYKKGGPSLEFSCVAYPDEIVIDSLSVKNPDVSDDQIPYEGPSFQDLNESLQKKFHKYLEIRGIKPSSVNFLHEYMINKDSREYLVWLSKLKSFIQA 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03628 675 MobiDBLite consensus disorder prediction 544 570 - -
Tsu04g03628 675 Gene3D Mitochondrial glycoprotein 475 673 IPR036561 -
Tsu04g03628 675 Pfam 60Kd inner membrane protein 160 347 IPR001708 GO:0016021|GO:0032977
Tsu04g03628 675 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEIN OXA1L 70 408 - -
Tsu04g03628 675 SUPERFAMILY Mitochondrial glycoprotein MAM33-like 480 673 IPR036561 -
Tsu04g03628 675 Pfam Mitochondrial glycoprotein 490 673 IPR003428 GO:0005759
Tsu04g03628 675 MobiDBLite consensus disorder prediction 387 414 - -
Tsu04g03628 675 MobiDBLite consensus disorder prediction 30 49 - -
Tsu04g03628 675 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 159 346 IPR028055 -
Tsu04g03628 675 PANTHER OXA1 70 408 IPR001708 GO:0016021|GO:0032977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03628 Tsu-Chr4 45378760 45386426 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03628 104 358 Chloroplast and Mitochondria Gene Families AT2G28800 26.241 7.59e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03628 K03217 - gmx:100817052 593.578