Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03623 aTGGCTTCTTCCAATCTCACCAACCTAACCattccatcttcttcttcttcccccAACGATCCCAATCCACAAATCATTTACAGTAGGTCCCACTCCTTCGTCGGCCCTTCCCCTCGCTACCCTCCTCCTTCCGATAACAACAACTCTCTCTTCTTCCTCGAAGAAGAACTCTCCTCCAACACCGACGAAGAAGAACAACCCCTCCAACGCAAATTCGGACCCTCTGATTTCCAAATTCTCAAAGTTATAGGACAAGGTGCCTTTGGCAAAGTCTTCATGGTCAGAAGAAAAGGTTCTTCCGATAACAACGACGGTAACGAAATATTCGCTATGAAGGTTATGAGAAAAGACAAcataattaagaaaaatcatgTTGATTATATGAAAGCTGAAAGAGATATTCTCACTAAAGTTCTTCATCCTTTCATTGTTCCTCTTCGCTACTCTTTCCAAactaaatctaaattatatttgattttggaCTTTATAAATGGTGGCcatcttttctttcaattatgTCGACAGGGAATTTTTAGTGAGGATGAGGCAAGGATTTACACTGCTGAGATTGTATCTGCTGTTTCACATCTTCACACCAAAGGCATCGTGCATCGAGATCTTAAACCTGAAAACATACTTATGGATTCTGATGGCcatGTTATGTTAACGGATTTTGGAATGTCGAAAGAGATTGACGAATCTGAGAGATCTAACTCATTGTGCGGGACTACAGAATATATGGCTCCAGAAATCCTTCTAGGGAAAGGCCATAACAAGGATGCGGATTGGTGGAGTGTTGGTGTTCTCTTGTATGAAATGATTACGGGAAAGGCACCATTTACGCATACTAACAGAAAGAAGCTACAGGAGAAAATTATCAAAGAGAAAGTTAAACTTCCACCATATCTTACTGGTGAAGCTCATTCTTTGCTCAAAGGATTGCTGCAAAAGGATCCGTCAACAAGATTAGGCAGTGGGCCAAATGGACATGAACAGATAAAAAACCATAAATGGTTTAGGACAATCAATTGGAACAAATTGGAAGCAAGAGAAATACAGCCCAAGTTTAAACCAGCTGATGTGTCAGGAAAAGATTGCACAGCTAATTTTGACCGATGCTGGACAACGATGCCTCTTGAGGATTCACCAGCATCAACTCCGACAGGAGGTGACCATTTCCAGGGCTATACTTATGTGGCACCAAATCCTTGGCTTTCTTCTAGGTAA 1227 0.3896 MASSNLTNLTIPSSSSSPNDPNPQIIYSRSHSFVGPSPRYPPPSDNNNSLFFLEEELSSNTDEEEQPLQRKFGPSDFQILKVIGQGAFGKVFMVRRKGSSDNNDGNEIFAMKVMRKDNIIKKNHVDYMKAERDILTKVLHPFIVPLRYSFQTKSKLYLILDFINGGHLFFQLCRQGIFSEDEARIYTAEIVSAVSHLHTKGIVHRDLKPENILMDSDGHVMLTDFGMSKEIDESERSNSLCGTTEYMAPEILLGKGHNKDADWWSVGVLLYEMITGKAPFTHTNRKKLQEKIIKEKVKLPPYLTGEAHSLLKGLLQKDPSTRLGSGPNGHEQIKNHKWFRTINWNKLEAREIQPKFKPADVSGKDCTANFDRCWTTMPLEDSPASTPTGGDHFQGYTYVAPNPWLSSR 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03623 408 PANTHER RIBOSOMAL PROTEIN S6 KINASE 12 407 - -
Tsu04g03623 408 Pfam Protein kinase domain 77 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g03623 408 Gene3D Phosphorylase Kinase; domain 1 75 382 - -
Tsu04g03623 408 SMART pkinase_C_6 340 400 IPR000961 GO:0004674|GO:0005524|GO:0006468
Tsu04g03623 408 SMART serkin_6 77 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g03623 408 Pfam Protein kinase C terminal domain 361 398 IPR017892 GO:0004674|GO:0005524|GO:0006468
Tsu04g03623 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Tsu04g03623 408 ProSiteProfiles AGC-kinase C-terminal domain profile. 340 408 IPR000961 GO:0004674|GO:0005524|GO:0006468
Tsu04g03623 408 Gene3D Transferase(Phosphotransferase) domain 1 163 358 - -
Tsu04g03623 408 MobiDBLite consensus disorder prediction 1 31 - -
Tsu04g03623 408 SUPERFAMILY Protein kinase-like (PK-like) 75 389 IPR011009 -
Tsu04g03623 408 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 12 407 - -
Tsu04g03623 408 ProSitePatterns Protein kinases ATP-binding region signature. 83 112 IPR017441 GO:0005524
Tsu04g03623 408 MobiDBLite consensus disorder prediction 1 49 - -
Tsu04g03623 408 ProSiteProfiles Protein kinase domain profile. 77 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03623 Tsu-Chr4 45332362 45335622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03623 23 401 AGC Kinase Gene Family AT3G08720 61.881 1.22e-179 507
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Tsu04g03623 Pkinase 6e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03623 K04688 - gmx:100798259 633.639