Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03602 ATGAAACAGACTTGTGGAAAGGAGTTGAATACTAAGGAATTAAGAACTTTGCAGCTTCAGTTCGAAAACAGCATTTCTCTCCCTGTCTTTACAGGAGCTCGAATTGAAGGAGAAGATGGCTCAAACTTAAGGATAAGATTAGTTGATGCTTTAACAGGGAAGGTTGTTTGTACAGGACCTGAATCTTCAGCTAAGGTGGAAATTGTAGTCCTTGAGGGTGATTTCGAAGAAGAAAGCGATGTTTGGATGCCTGAAGATTTCAAGAACAATATTGTGAGAGAGAGGGATGGAAAAAAGCCTCTCCTTACAGGAGAAGTGATTTTATATCTTAAAGATGGGTTTTGTATGGTGGGTGAAATTTCATATACTGATAATTCAAGCTGGACAAGGAGCCGTAGGTTCCGGCTTGGAGCAAGAGTATTGGACAACTTTGATGGTATTAGAATAAGAGAAGCAAAGACAGATTCATTTATTGTCAGGGATCACAGAGGAGAATTGTACAAGAAACACCACCCTCCATGTCTGTCGGATGAAGTTTGGAGACTGGAAAAGATAGGCAAAGATGGAGCTTTCCACAGGCGTTTGAGTCGTGAAAAGATCCGCACCGTTAAAGATTTTCTCACACTACTCAATCTCGACCCAGCAAAGCTGCGAACTATATTAGGCACTGGGATGTCTGCAAAGATGTGGGATGTAACTGTAGAGCATGCTCGGACTTGTGTTCTTGATACAACAAGGCATGTGTCCTTTGCCGCTCATTCTCAACAACCTCATGTGGTCTTCAATGCCGTGGGACAAGTGACAGGACTGCTCTCTGAATGCGAGTATGTCGCTGTAGATAAGCTGTCTGAAACCGAAAAGGCTGATGCTCAAATCTCGGTTATTTCTGCACTTACCCAAGGCGATTTTGCCTCTTTAGAAGACGAGGCCTCCCTAATGGATGGTTATTCACACTTAACTAATGTACACTACTCCCCGGGCTCTCCAAGAACTGAGGGATCAAGTGCCAACAAGCTTTTGGCTCCACAAAAGATTGGAGGATTCAATTACACACAAGAAAGTGCCTCTTCTACAGATATCATGCCATCTATTTATTCAGTCGGTGGATCTAGTGGCTTGGATGACTATGGCTTGCCGAATTTTGACAGCATCGGCCTTAGATATGATCAGAATCTTGGCTTTCCAGTCCAAGTATCCAACTCTTTGATCTGCGACACGGATTCAATAGTCCATGCTTTCGGTGACGATGATCATCTGCAATTTTTCGACGCTGATCTTCAATCTCAGTGCCATATTGAAGCAGATTTACAGTGTGCTGTTGACAGCTTCATGCTGACACCTTCTACATCTATGTCTAATGGAAAAGCTCAGAGACGATGGAGAAAGGTAGTCAATGTTCTAAAATGGTTCTTGGTGAGGAAACGACGAAACCAATTATATAGGTAA 1446 0.4281 MKQTCGKELNTKELRTLQLQFENSISLPVFTGARIEGEDGSNLRIRLVDALTGKVVCTGPESSAKVEIVVLEGDFEEESDVWMPEDFKNNIVRERDGKKPLLTGEVILYLKDGFCMVGEISYTDNSSWTRSRRFRLGARVLDNFDGIRIREAKTDSFIVRDHRGELYKKHHPPCLSDEVWRLEKIGKDGAFHRRLSREKIRTVKDFLTLLNLDPAKLRTILGTGMSAKMWDVTVEHARTCVLDTTRHVSFAAHSQQPHVVFNAVGQVTGLLSECEYVAVDKLSETEKADAQISVISALTQGDFASLEDEASLMDGYSHLTNVHYSPGSPRTEGSSANKLLAPQKIGGFNYTQESASSTDIMPSIYSVGGSSGLDDYGLPNFDSIGLRYDQNLGFPVQVSNSLICDTDSIVHAFGDDDHLQFFDADLQSQCHIEADLQCAVDSFMLTPSTSMSNGKAQRRWRKVVNVLKWFLVRKRRNQLYR 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03602 481 PANTHER OS02G0177800 PROTEIN 1 475 IPR012416 GO:0005516
Tsu04g03602 481 Pfam Calmodulin binding protein C-terminal domain 253 302 IPR046829 -
Tsu04g03602 481 Pfam Calmodulin binding protein-like N-terminal domain 17 162 IPR046831 -
Tsu04g03602 481 PANTHER CALMODULIN-BINDING PROTEIN 60 A 1 475 - -
Tsu04g03602 481 Pfam Calmodulin binding protein central domain 175 240 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03602 Tsu-Chr4 45100320 45104660 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03602 1 288 Calmodulin-binding Proteins AT5G62570 61.246 5.78e-125 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03602 - - ccaj:109807600 796.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03602 04 45100320 45104660 Tsu04g03602 04 45100320 45104660 ECH