Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03551 ATGGATCTTAATATCTATGAGCTTGATAAGTCATCTACAAGGGAAAATGTTCCATGCAATAGCAACATGTGTAAACAAACACAATGCCCTTCATCTCGTAGTAGTTGTCGCTATGAAGTTGAGTATCTTTCAAATGATACTTCGTCTTCTGGATTCTTGATAGAAGATGTGTTACACTTGATTACAGATAATGATCAAACAAAAGATGTTAACACACAAATTACTATTGGTTGTGGCCAAGTTCAGACTGGTGTGTTTCTAAATGGTGCAGCTCCAAATGGTTTATTTGGACTTGGTATGGAAAATGTATCAGTTCCGAGCATCCTAGCCCAAAAGGGGCTTATTTCAGATTCTTTTTCAATGTGCTTTGGATCTGAAGGTTCCGGAAGAATCACGTTTGGCGATACCGGCAGCCCGGACCAAGGAAAAACACCATTCAACCTCAGGGAATTGCATCCAACCTATAACATCACCGTTACACAAATTGTTGTGGGAGGAAATGCTTCTGATATTGAGTTTCATGCAATTTTCGACTCTGGCACCTCATTCACATACCTAAATGACCCAGCTTATACACTAATATCTGAGAAGTTCAATTCTCTAGTCAAAGCTGCTCGACATTCGCCTCTATCACCTGATTCTGATCTCCCTTTTGAATATTGTTATGACATAAGCCCAGATCAGACAATTGAAGTTCCCTTTTTGAATCTAACAATGAAAGGTGGAGACGATTATTATGTCACAGATCCAATAGTACCAGTTTCTAGTGAGGTTGAAGGAAATCTTCTTTGTTTGGGGATACAGAAAAGTGGCAATTTGAATATCATTGGACAAAACTTCATGACTGGTTACCGTATAGTCTTCGATCGCGAGAACATGAATCTTGGTTGGAAGGAATCTAACTGTACTGATGAAGTGCTCTCCAATACAATACCTATAAACAAATCTCACCCTCCAGCAATTTCCCCTGCTATTGCTGTGAATCCTGTGGCTAGATCAGAACCATCAACCCTCTTTGTTTCACTAGTTTCAACAGGGAATTCACTTAGTTATAACTACTATGAAAAGACATGTCCTGATGTAGAGTTCATTGTTGCCAAGACAGTAAAAGCTGCCGCTGCTTCGGACAAAACTGTTCCTGCAGCACTTCTCCGAATGCACTTCCATGACTGCTTCATTCGGGGATGTGATGCTTCTGTGCTGCTAAACTCAAAAGGAAGCAACAAAGCAGAAAAAGATGGACCACCAAATGTTTCTCTGCATGGATTCTTTATCATTGATAATGCAAAGAAAGCAATAGAAGCTGCTTGCCCTGGTGTAGTCTCTTGTGCTGATATCCTGGCACTAGCAGCAAGAGATGCTGTATTTCTGTCTGGAGGTCCAGGTTGGGATGTTCCTAAAGGAAGAAAAGATGGAAGAATATCCAAGGCCAGTGAAACAATACAGTTACCATCACCAGCCTTCAACATATCACAACTACAGAAGAGCTTCTCTCAAAGAGGTCTCTCAATGGAAGACTTGGTAGCTTTGTCAGGAGGACATACCTTAGGTTTCTCTCATTGCTCATCCTTCAACAGCAGAATCTATAACTTTGATGCTACACATGATGTGGATCCTACAATAAGTCCATCATTTGCATCAAAGCTAAAATCAATTTGTCCAATAAAAAATCAGTTAAAGAATGCAGGCACCACTTTAGATGCTTCTACAACTACATTTGATAATACATATTACAAGTTGATCCTCCAAAGGAAGGCCATCTTTTCTTCTGATCAAGTTCTTATCGATACACCAAATACCAAAGATCTTGTTTCAAAGTTTGCTACCTCACAAGATGCATTTTATAAGGCTTTTGTGAAATCTATGATCAAAATGAGTAGCATCAATGGTGGTCAAGAGATTAGGAACGACTGTAGGGTGGTTAATTAG 1929 0.3966 MDLNIYELDKSSTRENVPCNSNMCKQTQCPSSRSSCRYEVEYLSNDTSSSGFLIEDVLHLITDNDQTKDVNTQITIGCGQVQTGVFLNGAAPNGLFGLGMENVSVPSILAQKGLISDSFSMCFGSEGSGRITFGDTGSPDQGKTPFNLRELHPTYNITVTQIVVGGNASDIEFHAIFDSGTSFTYLNDPAYTLISEKFNSLVKAARHSPLSPDSDLPFEYCYDISPDQTIEVPFLNLTMKGGDDYYVTDPIVPVSSEVEGNLLCLGIQKSGNLNIIGQNFMTGYRIVFDRENMNLGWKESNCTDEVLSNTIPINKSHPPAISPAIAVNPVARSEPSTLFVSLVSTGNSLSYNYYEKTCPDVEFIVAKTVKAAAASDKTVPAALLRMHFHDCFIRGCDASVLLNSKGSNKAEKDGPPNVSLHGFFIIDNAKKAIEAACPGVVSCADILALAARDAVFLSGGPGWDVPKGRKDGRISKASETIQLPSPAFNISQLQKSFSQRGLSMEDLVALSGGHTLGFSHCSSFNSRIYNFDATHDVDPTISPSFASKLKSICPIKNQLKNAGTTLDASTTTFDNTYYKLILQRKAIFSSDQVLIDTPNTKDLVSKFATSQDAFYKAFVKSMIKMSSINGGQEIRNDCRVVN 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03551 642 Gene3D Peroxidase, domain 2 484 625 - -
Tsu04g03551 642 ProSiteProfiles Peptidase family A1 domain profile. 1 298 IPR033121 -
Tsu04g03551 642 Gene3D Acid Proteases 2 135 IPR021109 -
Tsu04g03551 642 SUPERFAMILY Heme-dependent peroxidases 349 642 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tsu04g03551 642 Pfam Xylanase inhibitor C-terminal 155 298 IPR032799 -
Tsu04g03551 642 ProSiteProfiles Plant heme peroxidase family profile. 348 642 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g03551 642 SUPERFAMILY Acid proteases 3 302 IPR021109 -
Tsu04g03551 642 Pfam Xylanase inhibitor N-terminal 5 135 IPR032861 -
Tsu04g03551 642 Gene3D - 352 642 - -
Tsu04g03551 642 PANTHER PEROXIDASE 336 641 - -
Tsu04g03551 642 CDD secretory_peroxidase 349 641 IPR033905 GO:0004601|GO:0042744
Tsu04g03551 642 Gene3D Acid Proteases 139 304 IPR021109 -
Tsu04g03551 642 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 175 186 IPR001969 GO:0004190|GO:0006508
Tsu04g03551 642 PRINTS Plant peroxidase signature 580 597 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g03551 642 PRINTS Plant peroxidase signature 358 377 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g03551 642 PRINTS Plant peroxidase signature 620 633 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g03551 642 PRINTS Plant peroxidase signature 440 450 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g03551 642 PRINTS Plant peroxidase signature 505 517 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g03551 642 PRINTS Plant peroxidase signature 459 474 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g03551 642 PRINTS Plant peroxidase signature 421 434 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g03551 642 PRINTS Plant peroxidase signature 564 579 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g03551 642 PRINTS Plant peroxidase signature 382 402 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g03551 642 PRINTS Haem peroxidase superfamily signature 506 521 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g03551 642 PRINTS Haem peroxidase superfamily signature 566 581 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g03551 642 PRINTS Haem peroxidase superfamily signature 441 458 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g03551 642 PRINTS Haem peroxidase superfamily signature 459 471 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g03551 642 PRINTS Haem peroxidase superfamily signature 380 394 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g03551 642 PANTHER PEROXIDASE 25-RELATED 336 641 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g03551 642 ProSitePatterns Peroxidases proximal heme-ligand signature. 506 516 IPR019793 -
Tsu04g03551 642 Pfam Peroxidase 365 610 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03551 Tsu-Chr4 44675689 44681281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03551 348 641 Peroxidase AT5G42180 66.102 4.06e-148 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03551 K00430 - lja:Lj1g3v0715550.1 553.132