Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03543 ATGATGAAGCTTTCCACCTTTAAATCTTTTTATATCTGTTGTTTTCTAGTTTTTCTTAATCCATTTGTTGTTATAGCTACATTTAAACCACTCTATAAAAACTATTCATTTCCTGCTGTTATTGCATTTGGTGATTCAATCTTAGATACTGGAAATAACAACTATATTGCAACAATAATAAAGGCGAATTTCAAGCCGTATGGCAGggattttattggaaaaaaaccGACGGGAAGGTTTTGCAATGGAAGAATCCCTTCTGATTATTTCCTTGAATACCTTGGTATTAAGGAGGCTATGCCAGCTTATCTTGATCCAAATTTGAGCACTGAAGAACTCTTAACAGGAGTGTGTTTTGCATCAGCTGGTTCAGGATATGATCCTCTTACAATTGAACTAGCAtcaGCAATTTCAGCAGAGGATCAACTAGATATGTTCAAAGAATATATTGGAAAATTGAAGGAAGCTGTGGGAGAAAATAGGACAGCTGAGATTATTGCAAATAGCATAATGCTCATAAGCATGGGAAGTAATGATATTTCAGAAACATATTATTTGACTCCATTTAGAAGGTTTGAGTATGATATAGAAAAGTATACAACTATGCTTGTTAGtgcaaatacaaaatttattcagGATCTTTATCAATTGGGAGCAAGAAGGATTGGAGTGTTCAGTTTATCGCCGGTTGGATGTGTGCCACTTCAAAGAACTATAAAAGGAGgcataaaaagaaaatgtgtaGAAAATGTAAATGAGGGAGCATTGATTTTCAACTCCAAGCTTTCCGATTCAACTATAGATCTATCAAAAAAACTTCCAGATTCCAGGATTGTCTACCTTGAAAATTTTACTCTATTGGATGACATTATCATAAACCACAATAAATATGGCAAGTATCTCTACTTAATACATATCTAA 921 0.3181 MMKLSTFKSFYICCFLVFLNPFVVIATFKPLYKNYSFPAVIAFGDSILDTGNNNYIATIIKANFKPYGRDFIGKKPTGRFCNGRIPSDYFLEYLGIKEAMPAYLDPNLSTEELLTGVCFASAGSGYDPLTIELASAISAEDQLDMFKEYIGKLKEAVGENRTAEIIANSIMLISMGSNDISETYYLTPFRRFEYDIEKYTTMLVSANTKFIQDLYQLGARRIGVFSLSPVGCVPLQRTIKGGIKRKCVENVNEGALIFNSKLSDSTIDLSKKLPDSRIVYLENFTLLDDIIINHNKYGKYLYLIHI 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03543 306 Gene3D SGNH hydrolase 28 300 IPR036514 -
Tsu04g03543 306 CDD SGNH_plant_lipase_like 38 298 IPR035669 -
Tsu04g03543 306 Pfam GDSL-like Lipase/Acylhydrolase 40 283 IPR001087 GO:0016788
Tsu04g03543 306 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 40 51 IPR008265 GO:0006629|GO:0016298
Tsu04g03543 306 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 2 298 - -
Tsu04g03543 306 PANTHER GDSL ESTERASE/LIPASE EXL3 2 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03543 Tsu-Chr4 44634045 44639537 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03543 34 298 Pollen Coat Proteome AT1G75910 42.910 1.66e-71 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03543 - - mtr:MTR_8g075200 486.878