Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tsu04g03533 | ATGACTTCTCAAAATCCTAACCACAAAAATTCCCTTTACCCAGAAGTTATAGATTCAAATCCGGAGGCATCCTCACCCTTCATCTCTAACCCTAATCCAACCTCTTCCTCTCTATACCCTACCATCGACGTCTCCGACCTCGTCGAAGATCTCTTCCCGGAAAACACCACTCCTTCCGCTCCTCCGATCGAAGCCGAATATTTCTTCCCGGAAAATACCAGTCCTTCTGCTCCTCCGATCGATGCCGAAGATTTCTTCCCGGAAAACACCAGTCCTTCCGATCCTCCAATCGCAGCCGAAGATATCCTCATCAAGGTCCCTGGCGCCATTCTCCACCTTATTGATCAACAATACAGCGTCGAGCTCGCGATCGGCGAACTCACCATTATTCGTCTCCGGCAGGGACACAATACTCTTGCCATTTACGCTCGTGTCGCTGATGAGATCCAATGGCCACTTGCCAAGGATGAGGCTGCTGTCAAGGTCGACGACTCACATTACTTCTTCTGTTTTTGTGTGCCGAAGGAAAAATGTGATTCCGATTCGAGTGATTCAAGCGAcgaggaaaaagaaaaggacaAGGATAAGAAAAAGAATCTACGGAGTAAAAGTCGCCGGAAAGGAGACGATGGTTTGGAATTGCTTAGCTATGGATTGACGATTGCATCGAAAGGACAAGAGGATTTGGTGAAGGAGCTTGATGAGGTTTTGAAGGAATGTAGCAATTTTTCTGTTCAGCAGGTTTCGGAAAAGGCGAAGAAGAAAGGAGAGGCTTTAGATGCTTCTTTGGCGATGGAGATATCACCGGAGGATTTGGATACGGTGAAGGAGAAGAAGGAATTGATGGAGGAAAGGTGTGCTGCTTATTGGACTACATTGGCTCCTAATGTGGAGGATTACAGTGGAACAGCTGCGAAGCTTATTGCGGCCGGTTCTGGACAATTGGTTAAGGGAATTTTGTGGTGTGGTGATGTTACTGTTGATAGGTTGAAATGGGGAAATGAGTTCATGAAGAAGAGGATGGGTCCTCCTTCACAGGCTGAGATTAGTCCCCAAACCCTAAGAAGAATCAAAAGGGCAAAGAAAGTGACTAAAATGACAGAGAGTGTTGCCACGGGGGTCCTCACCGGAGTTGTGAAAGTGTCTGGGTTTTTCACCAGTTCAGTGGCAAATTCCAAAGCAGGAAAGAAATTTTTCAAGCTTCTACCTGGCGAAGTTGTGCTTGCATCATTGGATGGATTCAGCAAGCTGTGTGATGCTGTCGAAGTAGCAGGAAAAAATGTTATGTCAACATCAAACACCGTGACAACCGAGATTGTCCATCACAGATATGGAGAAGAAGCTGCCAAGGCAACTAGTGAAGGACTAGATGCTGCTGGTCATGCGGTGGGGACTGCATGGGCTGCTTTTAAGATTCGACAGGCTTTAAATCCTAAAAGTGTTCTAAAATCTGCCTCCATGGCCAAATCTGCAGCTAAAGCTGCTGCAGATGAATATAAGGCTAAAAAATCAAAAGTAAGTTACAAGTGGCAGAAGACAAAAGACAAAAGCTCTTCTGTATGTTTGCCAGGTTCAAGTTCTCCTATTATGGCTACTAAGTGCATGCATGTTTTTGATAGATTGATGTTTTCTGTAACTTGTTGGAAGAAAAGTAGGACACAAACTGGCAGAAGAAAGTTCCATAGGGAtgtagaaaaagaagaattcCAGTATGCAAGTACTCAATGTCTATCATCCTATTACAGTGTCTTTGTCGTTCGCCTTGCAATCATGGTTATGCTAGCTATCTTGATTGGTCTACTCACTATCCTAACATGGCATTTCACAAAGATTTATACAACAAAATCCCTAAATAGTTTGGCTTATGACCTGCGTTACGAGCTTCTGCAACGTCCCATCTTAAGGATGTGGAACATTTTGAACTCTACTGCGGAAATCACAACTGCTCAAGTTAAGTTGTCTGAGTATGTTATCAGAAGCCACAACAACCTAGCCACTCAAGAAGATCATGTTGAGATGTATGAAGCCATGAGAGCTGTGACATGGGCACTGTTTTCTAGTCGAAAAGCTCTCAACTCGATAACTGTCAAATATGGAAACGGTTTTGTTCAGGCATTTCATAGAGACTTGAAGGATAATAATACTTTTTACATTTACACTGATCTTGCATATAACGAGACCAGTGAAGCTTTGAATGATAAAGACATTCATAACAAGACTGCGATTTGGTACCGAGAACAGCTTGATCCATTTAGTGGCGAGAAGATTGGAAAAGCAATGAAAATTGCACCAGAAGACTCAATCAGTATAGCTGGCATGTCACAAGTACCTGATGGTGTAGCTTCGTGGCACGTTTCTGTGAGCAAGTTTACGGATTCACCGCTACTTTCAGCAGCATTGCCAGTTTGGGATTCTTCTAATAAGAGTATTGTAGCAGTTGTCGGTGTCACAACAGCGCTTTATAGTGTAGAGCAGTTAATGAAGGAACTAGTCGACAAGCACAGTGGTCATATGTATTTGACCTCTCAAAAGGGCTATTTGCTTGCAACTTCCACAAATGACCCTCTACTGACAAATTCAACAAAGAAACCTAAGCTTAAAATGGCTGTTGATTGTGATAATGAAGTAATAAGAGAGGGAGCAAGGTGGCTACAGAAAACCTATGGGAACAATTTCCCTCCAAGTCATGAGGTTCATGTAGAGAATGCCAGGCTAGGTCACCAGCAATATTACATTGACTCGTTCTTCCTAAACTTGAAAAAGCTTCCTCTGGTGGGTGTAATAATCTTACCAAGGAAGCATATCATGGGGCAGGCAGATCAAAGAGCCTACAAAACATTGGTTATTCTGATATCTGCATCATTGTGTATTATTGTCATTGGATGTGTTTGCATTTTGATATTGACAAATGGAGTATCAAAGGAAATGAATCTAAGAGCAGAATTAATCAGTCACCTGGAAGCAAGAAGGAAAGCGGAGGCATCAAGCAACTATAAAAGCCAATTTCTTGCAAATATGAGTCATGAATTACGGACACCGATGGCAGCAGTAATCGGATTACTTGATATTCTTTTGTCTGATGATTGTCTCACAAATGAACAATATGCAACCGTTactcaaataagaaaatgttcGACCACATTGCTCCGTTTACTCAATAACATCTTGGATCTAAGCAAGGTGGAATCTGGAAAACTTGTCCTAGAAGATGCAGAATTTGACTTGGGAAAGGAACTCGAAGGGCTTGTAGATATGTTTTCTGTGCAATGCATTAACCACAGTGTAGAAATTATTTTAGACCTTTCTGATGATATGCCAAAGATAGTTCGGGGAGATTCTGATAGAGTTGTTCAAATTTTTGCGAATTTGATCAACAACTCAATCAAGTTTACTCTATCCGGTCACATAATTCTGAGAGGATGGTGTGAAAATCCAAATTCTTATGATGATAACGAAAGTTTTACTGTGGAGCAGAAGAAATTGGCGTGTTCCCAGAAGACCATAACAAAGCAGCATGAAAACCATGCAAAGAAGACTTCTAATAATGATAACAAAATGATACTTTGGTTTGAAGTCGATGACACGGGCTGTGGTATTGACCCAAGTAAATGGGATTCGGTGTTTGAAAGCTTTGAGCAAGCTGACCTATCAACTACTAGACTGCATGGAGGCACTGGTCTTGGTCTTTGCATTGTCAGATCCTTGGTTAATAAGATGGGTGGAGAAATTAAGATTATCAAAAAGGAAGGCCCAGGAACACTAATGCGATTATATCTGCAACTCACCGCACCTGTCGATGCCGCAGAACAACAATGTCAAGTAGATTTTGCTAACAATAACTTAGTGGTACTTCTTGCACTACATGGCAACATGAGTAGATTAATTACATCTAAGTGGTTAAAGAAAAATGGCGTGGTCACTATGGAAGCATCTGAATGGAATGGATTAACACAAGTTCTAAAAGAACTATTTCATGCAAAAACTCCAACTCATAACAATGAATTCGATGCACATTATTCAGCTCATCGGGGTCTGAAATCTAAACTGCCGAGCCTGCAAGAATTGACAAACCCAACATTTGTCATTGCCGTTGACATTGATCTACTTGACTTGAGCACAGATATTTGGAAGGAACAACTTAACTTCCTTCACAAGTACTACGCAAGAGGAAAATTCATATGGTTACAAAACCATGACTCGTCCAATACCGTAAAGACGGAGCTTCGCAAGAAAGGACATATACTAATTGTCAACAAACCTCTTTACAAAGCAAAGATGATTCATATTTTGGAAGATGTCATAAAGGAAAGAAATATTGAGGTaccaaagaaaaatatgattacTCCAAGAACCACAGTGAAAGAGAGTGATTTGCATGAGAGTTTTGAAATCGATTATAATCATTGTGATGTTGCAAGCTCAGATGGTTCTGACATATCGGAAATTGGTAGTTCTAATCCATCATCACTATATCTAAAAAGTAACTGCTTGTTAGGATTAACTAATGAATATTTGGAACAAAATAATTCTAGGAAAGAAGCATCCATTTCGAAAAGAGAAAAAGGTGAAGATTCTGAATGTGGTAGGGTCAATGGTTCAACTAAAGCTGTGAATGGAAAGAAGTCTCTTGAAGGTTTGAGGATATTGCTTGCAGAAGACACAGCAGTAATTCAAAGGGTTGCGACCATAATGCTAGAAAAAATGGGAGCCATTGTTGTTGCTGTAGGTGATGGACAACAGGCAGTGGATGCTCTAAATGGCACGCTTGGTGCCGAAGATTGTAGAAAAGAGTCTCTCTTAAAGGAAAGGAACAAAGAAACATCTCAAACTGAGATTCTAAGCTTCCCTGCATATGACTTGATCCTTATGGATTGCCAGATGCCAAAGATGGATGGATATGAAGCAACAAAAGAAATAAGGAAATCAGAAGTAGGAAGTGGATTCCACATTCCAATTGTTGCTCTTACAGCTCATGCAATGTCATGTGATGAAGCCAAATGTTTGGAAGTTGGCATGGATGCTTATTTAACTAAGCCAATTGACTTTAAACTTATGGAGTCTACCATTCTTTCACTCACAAGAGAGAAACCTTAA | 5094 | 0.405 | MTSQNPNHKNSLYPEVIDSNPEASSPFISNPNPTSSSLYPTIDVSDLVEDLFPENTTPSAPPIEAEYFFPENTSPSAPPIDAEDFFPENTSPSDPPIAAEDILIKVPGAILHLIDQQYSVELAIGELTIIRLRQGHNTLAIYARVADEIQWPLAKDEAAVKVDDSHYFFCFCVPKEKCDSDSSDSSDEEKEKDKDKKKNLRSKSRRKGDDGLELLSYGLTIASKGQEDLVKELDEVLKECSNFSVQQVSEKAKKKGEALDASLAMEISPEDLDTVKEKKELMEERCAAYWTTLAPNVEDYSGTAAKLIAAGSGQLVKGILWCGDVTVDRLKWGNEFMKKRMGPPSQAEISPQTLRRIKRAKKVTKMTESVATGVLTGVVKVSGFFTSSVANSKAGKKFFKLLPGEVVLASLDGFSKLCDAVEVAGKNVMSTSNTVTTEIVHHRYGEEAAKATSEGLDAAGHAVGTAWAAFKIRQALNPKSVLKSASMAKSAAKAAADEYKAKKSKVSYKWQKTKDKSSSVCLPGSSSPIMATKCMHVFDRLMFSVTCWKKSRTQTGRRKFHRDVEKEEFQYASTQCLSSYYSVFVVRLAIMVMLAILIGLLTILTWHFTKIYTTKSLNSLAYDLRYELLQRPILRMWNILNSTAEITTAQVKLSEYVIRSHNNLATQEDHVEMYEAMRAVTWALFSSRKALNSITVKYGNGFVQAFHRDLKDNNTFYIYTDLAYNETSEALNDKDIHNKTAIWYREQLDPFSGEKIGKAMKIAPEDSISIAGMSQVPDGVASWHVSVSKFTDSPLLSAALPVWDSSNKSIVAVVGVTTALYSVEQLMKELVDKHSGHMYLTSQKGYLLATSTNDPLLTNSTKKPKLKMAVDCDNEVIREGARWLQKTYGNNFPPSHEVHVENARLGHQQYYIDSFFLNLKKLPLVGVIILPRKHIMGQADQRAYKTLVILISASLCIIVIGCVCILILTNGVSKEMNLRAELISHLEARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILLSDDCLTNEQYATVTQIRKCSTTLLRLLNNILDLSKVESGKLVLEDAEFDLGKELEGLVDMFSVQCINHSVEIILDLSDDMPKIVRGDSDRVVQIFANLINNSIKFTLSGHIILRGWCENPNSYDDNESFTVEQKKLACSQKTITKQHENHAKKTSNNDNKMILWFEVDDTGCGIDPSKWDSVFESFEQADLSTTRLHGGTGLGLCIVRSLVNKMGGEIKIIKKEGPGTLMRLYLQLTAPVDAAEQQCQVDFANNNLVVLLALHGNMSRLITSKWLKKNGVVTMEASEWNGLTQVLKELFHAKTPTHNNEFDAHYSAHRGLKSKLPSLQELTNPTFVIAVDIDLLDLSTDIWKEQLNFLHKYYARGKFIWLQNHDSSNTVKTELRKKGHILIVNKPLYKAKMIHILEDVIKERNIEVPKKNMITPRTTVKESDLHESFEIDYNHCDVASSDGSDISEIGSSNPSSLYLKSNCLLGLTNEYLEQNNSRKEASISKREKGEDSECGRVNGSTKAVNGKKSLEGLRILLAEDTAVIQRVATIMLEKMGAIVVAVGDGQQAVDALNGTLGAEDCRKESLLKERNKETSQTEILSFPAYDLILMDCQMPKMDGYEATKEIRKSEVGSGFHIPIVALTAHAMSCDEAKCLEVGMDAYLTKPIDFKLMESTILSLTREKP | 1697 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tsu04g03533 | 1697 | PANTHER | TWO-COMPONENT HISTIDINE KINASE | 1516 | 1694 | - | - | |
| Tsu04g03533 | 1697 | SMART | HKATPase_4 | 1111 | 1263 | IPR003594 | - | |
| Tsu04g03533 | 1697 | MobiDBLite | consensus disorder prediction | 1510 | 1533 | - | - | |
| Tsu04g03533 | 1697 | Pfam | Response regulator receiver domain | 1548 | 1686 | IPR001789 | GO:0000160 | |
| Tsu04g03533 | 1697 | SMART | REC_2 | 1546 | 1689 | IPR001789 | GO:0000160 | |
| Tsu04g03533 | 1697 | ProSiteProfiles | Histidine kinase domain profile. | 1005 | 1263 | IPR005467 | - | |
| Tsu04g03533 | 1697 | PANTHER | OSMOSENSOR HISTIDINE KINASE | 530 | 1490 | - | - | |
| Tsu04g03533 | 1697 | Gene3D | - | 1529 | 1692 | - | - | |
| Tsu04g03533 | 1697 | Pfam | Senescence domain | 307 | 493 | IPR009686 | - | |
| Tsu04g03533 | 1697 | CDD | REC_hyHK_CKI1_RcsC-like | 1548 | 1689 | - | - |
Showing 1 to 10 of 29 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tsu04g03533 | - | - | gmx:100801970 | 1867.43 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Tsu04g03533 | 04 | 44514041 | 44525122 | Tsu04g03533 | 04 | 44514041 | 44525122 | ECH | |
| Tsu05g00859 | 05 | 7438762 | 7443721 | Tsu04g03533 | 04 | 44514041 | 44525122 | PCT |
Showing 1 to 2 of 2 entries