Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03531 ATGGGTTCTATTGGAATTCAAAGTTCAGAAACTGAAGTTGTTACCATTGATGTACTTGTAACAAAGTCTCTCATCGAAACCACCCATGTTTATCTTGATGTCAGaaCGGTGGAAGAGTTTGAGAAAGGGCACGTGGACGCAGAGAAAGTTATTAACATTGCATATATGTTTAATACACCCGAAGGGAGGGTGAAGAACCCAGAGTTTTTGAAGGAGGTTTCATCTCTTTGCAAGAAAGAAGATCACCTCATCGTGGGTTGTCAAAGTGGAGTGAGGTCTGTGTATGCAACTACTGATCTTCTGGCTGAAGGGTTTAAGGATGTGTCCAACATGGGAGGAGGTTATTTGGATTGGGTTAAAAAGGAATTTCCTGTCAAGATAGTACATGCCACTAAATAG 399 0.411 MGSIGIQSSETEVVTIDVLVTKSLIETTHVYLDVRTVEEFEKGHVDAEKVINIAYMFNTPEGRVKNPEFLKEVSSLCKKEDHLIVGCQSGVRSVYATTDLLAEGFKDVSNMGGGYLDWVKKEFPVKIVHATK 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03531 132 CDD RHOD 30 119 - -
Tsu04g03531 132 SMART rhod_4 16 124 IPR001763 -
Tsu04g03531 132 Pfam Rhodanese-like domain 26 120 IPR001763 -
Tsu04g03531 132 PANTHER THIOSULFATE SULFURTRANSFERASE 18 8 127 - -
Tsu04g03531 132 ProSiteProfiles Rhodanese domain profile. 29 127 IPR001763 -
Tsu04g03531 132 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 13 125 IPR036873 -
Tsu04g03531 132 PANTHER THIOSULFATE SULFURTRANSFERASE 18 8 127 IPR044684 GO:0003824
Tsu04g03531 132 Gene3D - 5 127 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03531 Tsu-Chr4 44488088 44489889 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03531 3 125 Sulfurtransferasese or Rhodanese AT5G66170 55.285 1.13e-49 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03531 - K15692 cam:101497130 228.794
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03531 04 44488088 44489889 Tsu04g03531 04 44488088 44489889 ECH
Tsu05g00854 05 7415586 7417627 Tsu04g03531 04 44488088 44489889 PCT
Tsu05g00900 05 7807966 7810197 Tsu04g03531 04 44488088 44489889 PCT