Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03493 ATGAGGTGGTGCAGTGAGGCTATCTCATTCTCAGGTGCACATGCACTCGCTCCTGTAGCTTTATTCACCAACAATACTCTACCATTTCAATTCCATAAccctttcttcttcaaattcaaattcaacaacTCCTCCTTTTCTTCTACCTCTCTCACCTATCGGAAACCGTTTGCTGCTCAAATACAACCGTCAAGCTCAACGGACAGTTTTGATTTTGTGGTTATTAATTTCTACcattttgtgttcattaaaGATCCACAACAAGAAGTCGCCAAACACCTATCTTTCTTGGAATTAGAGGGTCTAGACATCCATGGAAGAATCTATTTGAATGAACAAGGGATTAATGCGCAGTATAGTGGGCCATCAAAAGACGCTATGGTGTATGTCAACTGGATAAAAGAGGATGACAGGTTTTCCGACATCCTGGTTCAGATATCTCAATCAGAAACTGGACACGCCTTTCCATCATTGAAATTGCGATATAAGCCTTCATTAGTACAGTTTAAAAGTGATGTATCAGATCTTCCGGTGCTTGATCCTTCAATGCGGGCAATACCTTTAGCACCTTCAGAATGGAGAGATAAATTAGAAGCCATCAATAGAAATGATCAACATTCAAAAGATCATCCTAACAGAGATTACATTCTATTGGATGTGAGAAATGGTTATGAGTGGGACATTGGACATTTTCGTGGGGCTCAACGACCTAATGTGGACTGCTTTAGGAGCACTTCATTTGGACTGTCTCAGGAAGAGATCACTGCTTCAGACCCTTTATCAAATGTAGATAAAGAAAATACAAACATATTGATGTATTGCACAGGAGGGATTCGCTGTGATGTGTATTCTACAATACTGAGGCAGCATGGATTTCAGAATTTGTATACCCTTCAAGGAGGCGTTTCTAACTACATAAAGAACGAAGGTCCTGCTGAATGGATAGgaaatttatttgtatttgactccCGATTGTCTCTCCCTCCTCCTGTTTACTATCCTCAGGCCATTACTGAAGTTGGGACGACAACTCCAACTCCAGTTTCTAGTGATGATAAGTTCGCAAAATGCTACATATGTAGCTCGGGAGTCAGTGAACTGAGACATCGGAATTGTGCGAATATTGACTGTAACTTGCTTTTTCTATGCTGCAAAAAATGTGTAAAGGATCTAAGAGGATGTTGTTGTTTGACATGCACTATTGCTCCTAGGCTTAGACCTGTTTTAAATGGAGAGCATAGATACAAGAAATGGCACATCTATCGTGACATGCATTCGCACGGCAATACAAGAATTTCAACTTGA 1305 0.3862 MRWCSEAISFSGAHALAPVALFTNNTLPFQFHNPFFFKFKFNNSSFSSTSLTYRKPFAAQIQPSSSTDSFDFVVINFYHFVFIKDPQQEVAKHLSFLELEGLDIHGRIYLNEQGINAQYSGPSKDAMVYVNWIKEDDRFSDILVQISQSETGHAFPSLKLRYKPSLVQFKSDVSDLPVLDPSMRAIPLAPSEWRDKLEAINRNDQHSKDHPNRDYILLDVRNGYEWDIGHFRGAQRPNVDCFRSTSFGLSQEEITASDPLSNVDKENTNILMYCTGGIRCDVYSTILRQHGFQNLYTLQGGVSNYIKNEGPAEWIGNLFVFDSRLSLPPPVYYPQAITEVGTTTPTPVSSDDKFAKCYICSSGVSELRHRNCANIDCNLLFLCCKKCVKDLRGCCCLTCTIAPRLRPVLNGEHRYKKWHIYRDMHSHGNTRIST 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03493 434 Pfam Rhodanese-like domain 213 306 IPR001763 -
Tsu04g03493 434 CDD RHOD_YceA 188 307 - -
Tsu04g03493 434 Pfam UPF0176 acylphosphatase like domain 73 164 IPR040503 -
Tsu04g03493 434 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 66 429 - -
Tsu04g03493 434 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 66 429 IPR020936 -
Tsu04g03493 434 Gene3D - 181 335 IPR036873 -
Tsu04g03493 434 Pfam Rhodanase C-terminal 316 400 IPR022111 -
Tsu04g03493 434 ProSiteProfiles Rhodanese domain profile. 211 314 IPR001763 -
Tsu04g03493 434 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 182 328 IPR036873 -
Tsu04g03493 434 Gene3D - 61 167 - -
Tsu04g03493 434 SMART rhod_4 201 311 IPR001763 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03493 71 423 Sulfurtransferasese or Rhodanese AT1G17850 66.022 4.21e-179 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03493 - - mtr:MTR_3g006290 675.626