Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03474 ATGGCTCCTACAAAGAGCCATATCCCTCTTGTTTTCTTCCCAGCAAAAGGAGAGGTATTGCCAGAACCACTTGGTGTAGttctcattttttcttcttggaACTTTCCAATCATGTTAGCATTGGATCCATTAATTGGAGCAATATCTGCTGGAAATGTTGTAGTCATAAAACCATCAGATCAAGCTCCAGCATGCTCTTCTTTTCTTGCCAATACCCTTCCTCAATACTTGGACACTAATGCCGTAAAGGTCATTGAAGGTGGTGGAAATGTCTGCGAACAACTACTGCTACAAAAATGGGACAAAATATTCTTCACCGGAAGTCCGCGTGTTGCAAGCATAGTAATGACTTCTGCTGCAAGGAATTTAACTCCTGTTACTTTAGAGCTAGGAGGAAAATGCCCTGCTATATTTGATCACCTTTCCAATCCTTCAGATTTTAAGATGGCAGTGAAAAGAATAGTAGGAGCAAAGTGGGGAACCTGTAGTGGACAAGCATGTATAGGAATCGATTATCTGCTTGTCGAGGAGAAATTTTCATCTGAAGTGATAGAACTATTAAAGAAGTTTATCAGAAAATTTTATGGTGAGAACATGATAGAGTCAAGGGTACTATCAAGAATAGTAAACAAACAGCACTTTGAGAGATTATGTAACCTTCTTAAAGATCCTCTTGTTGCTGCATCAATAGTTCATGGTGGTTCAGTTGATGAAACAAACCTGTTTATTGAGCCAACAATCTTGTTAGATCCACCACTAGATGCTGAAATCATGACAGAAGAAATCTTTGGTCCTCTACTACCAGTGATCACAGTGAATAAAATTCAGGAAAGTATTGGATTTATAAAGTCAAGGCCAAAACCTCTTACCATTTATGCATTCACCAAAGATGATACTTTCAAGAGAAAGATTGTAGCAGAAACTTCCTCTGGAAGTGTTGTATTTAATGACACACTTGTTCAATTTTTATGTGATACACTACCATTTGGAGGTGTTGGACAAAGTGGTTTTGGGAGGTACCATGGAAAATACTCATTTGACACATTCAGCCATGAAAAAGCTGTAATGCATAGACATCTTTGCCTTGAAATTGAACCAAGGTATCCACCTTGGAGTAAGTTCAAGCTAGAATTTATCAGATTGGCATACAGATTGAACTACTTTGGATTACTACTTCACATGCTGGGATTGAAAAAATACGACTAG 1206 0.3765 MAPTKSHIPLVFFPAKGEVLPEPLGVVLIFSSWNFPIMLALDPLIGAISAGNVVVIKPSDQAPACSSFLANTLPQYLDTNAVKVIEGGGNVCEQLLLQKWDKIFFTGSPRVASIVMTSAARNLTPVTLELGGKCPAIFDHLSNPSDFKMAVKRIVGAKWGTCSGQACIGIDYLLVEEKFSSEVIELLKKFIRKFYGENMIESRVLSRIVNKQHFERLCNLLKDPLVAASIVHGGSVDETNLFIEPTILLDPPLDAEIMTEEIFGPLLPVITVNKIQESIGFIKSRPKPLTIYAFTKDDTFKRKIVAETSSGSVVFNDTLVQFLCDTLPFGGVGQSGFGRYHGKYSFDTFSHEKAVMHRHLCLEIEPRYPPWSKFKLEFIRLAYRLNYFGLLLHMLGLKKYD 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03474 401 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER F1 1 399 - -
Tsu04g03474 401 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 132 335 IPR016163 GO:0016620
Tsu04g03474 401 Pfam Aldehyde dehydrogenase family 20 355 IPR015590 GO:0016491
Tsu04g03474 401 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 2 353 IPR016162 GO:0016491
Tsu04g03474 401 PANTHER ALDEHYDE DEHYDROGENASE 1 399 IPR012394 GO:0006081
Tsu04g03474 401 SUPERFAMILY ALDH-like 10 370 IPR016161 GO:0016491
Tsu04g03474 401 PIRSF ALDH 1 397 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03474 Tsu-Chr4 43888766 43891843 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03474 3 399 Aldehyde Dehydrogenase Gene Family AT4G36250 62.972 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03474 K00128 - gmx:100809812 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03474 04 43888766 43891843 Tsu04g03474 04 43888766 43891843 ECH