Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03472 ATGGGATGGATTATAGGACTATGGTCTTTGATGGGTATTTTTTTATGTTGGTGGTATTTATGTGTGAAGAAGGAGAATAATAAAGGGatgaagaagaaaggaaaaattCCAAAAGGGAATAAAGGTTGGCCTTTACTTGGAGAGACCCTTGATTTCATTGCTTGTGGATACACTTCTAATCCTGTTAGCTTCATGGAAAAACGCAAGTCTTTGTATGGTAATGTGTTCAAGACAAGCATTTTAGGAACGGGTGTAATTGTGTCCACGGACCCAGAAGTGAATAAGGTGATTCTGCAAAACCAAGGGAACATATTTATCCCTGCTTATCCAAAATCAATTAGAGAACTAATGGGAGAACACTCTATACTTCAAATGAATGGAAACATGCATAGGAAAATTCATTCACTCCTTGGAGGATTTATGAGATCCCCACAATTCAAAGCTAGAATCACAAGAGATATTGAGCATTCTGTCAAACAATGTTTAGCTACTTGGACACATCAACCGGTATATGTTCAAGATCAAGTCAAAAAGaTTACATTTACTATTTTGGTGAAAGTTCTGATGAGCATTGATCCCGGTGAAGATTTATATATGttaaagaaagaatttgaagagtTCATCAAAGGATTGATTTGCTTGCCCATAAAATTTCCAGGAACAAGACTATATAAATCCTTGAAGGCTAAGGAGAGAATGATGAAAATTGTGCAAAGAATAATAGAAGAAAGGATTAATTATTATAAGAATAATAAGGATTGTGTGACAAATGATATAGTGGATGTACTCTTACAAGATAAAGGTGACTCTAACACAATTCCTAATATATGGTTGGAAAATATGAGTGAGAATATAATTGAGATGATGATTCCTGGGGAAGAGACTCTTCCTACAGCTATGACCATGGCTGTCAAGTTTCTCAGTGACTCTCCTCTTGCTCTATCCAAATTAGTGGAAGAGAACATGGAATTGAAGAGGAACAAGAATTGTTCTGATGGTTATGCATGGATTGACTACCTCTCACTACAATTTACTCAAAATGTAATCAGTGAAACTCTTAGAATGGCAAATATTGTCAATGCTATTTGGAGAAAAGCTATCAAAGATGTAGATATTAAAGGGTACCTAATTCCTAAGGATTGGTGTGTTGTGGCATCTCTTACATCTGTTCATTTAGATGGGATGAACTATGAAAAACCATTTGAGTTTGATCCATGGAGATGGGAGAAAATTGAAGCCGGGACTAGAAACAATTGTTTTACACCATTTGGCGGTGGACAAAGATTGTGTCCAGGGATTGAACTTTCTAGGCTAGAGCTCTCTATTTTCCTTCATCATTTAGTTACAACTTACAGATGGGTTGCTGAAAAAGATGAAATTATTTACTTTCCAACAGTAAAGATGAAAAGGAAGCTCCCAATTAGTGTGACAAACCTAAACCATTAA 1446 0.3499 MGWIIGLWSLMGIFLCWWYLCVKKENNKGMKKKGKIPKGNKGWPLLGETLDFIACGYTSNPVSFMEKRKSLYGNVFKTSILGTGVIVSTDPEVNKVILQNQGNIFIPAYPKSIRELMGEHSILQMNGNMHRKIHSLLGGFMRSPQFKARITRDIEHSVKQCLATWTHQPVYVQDQVKKITFTILVKVLMSIDPGEDLYMLKKEFEEFIKGLICLPIKFPGTRLYKSLKAKERMMKIVQRIIEERINYYKNNKDCVTNDIVDVLLQDKGDSNTIPNIWLENMSENIIEMMIPGEETLPTAMTMAVKFLSDSPLALSKLVEENMELKRNKNCSDGYAWIDYLSLQFTQNVISETLRMANIVNAIWRKAIKDVDIKGYLIPKDWCVVASLTSVHLDGMNYEKPFEFDPWRWEKIEAGTRNNCFTPFGGGQRLCPGIELSRLELSIFLHHLVTTYRWVAEKDEIIYFPTVKMKRKLPISVTNLNH 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03472 481 Pfam Cytochrome P450 37 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03472 481 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03472 481 PRINTS P450 superfamily signature 291 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03472 481 PRINTS P450 superfamily signature 421 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03472 481 PRINTS P450 superfamily signature 430 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03472 481 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 423 432 IPR017972 GO:0005506|GO:0016705
Tsu04g03472 481 PANTHER CYTOCHROME P450 26 6 476 - -
Tsu04g03472 481 Gene3D Cytochrome P450 25 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03472 481 PRINTS E-class P450 group I signature 430 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03472 481 PRINTS E-class P450 group I signature 280 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03472 481 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03472 481 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03472 481 PRINTS E-class P450 group I signature 420 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03472 481 PRINTS E-class P450 group I signature 386 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03472 481 PANTHER CYTOCHROME P450 FAMILY BRASSINOSTEROID OXIDASE 6 476 - -
Tsu04g03472 481 SUPERFAMILY Cytochrome P450 32 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03472 Tsu-Chr4 43869753 43878343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03472 35 452 Cytochrome P450 AT3G13730 52.370 3.03e-163 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03472 K12637 - gmx:100812489 819.69