Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03458 ATGTCAACGGAACCGCCCAAGCGCGAACAATGGCAATGGGAAAACGCCACCGCCGGAGCCGCCGCAGGATTCGCCACTGTCGCCGTTATGCATCCCCTCGACGTTGTCCGAACTAGGTTTCAAGTTAATGATGGTCGAGGCTCTCATCTTCCCAGTTACAAGAACACCGCTCACGCCATTTTCACCATTACCCGCTCCGAGGGATTAAGAGGGCTATATGCTGGCTTTCTTCCTGGGGTTCTTGGGTCAACTATATCGTGGGGtttgtatttctttttCTATGACAAAGCTAAACAAAGATATGCTAGGAGCAGAGAGGAGAAGTTGAGCCCAGGTCTTCATCTTGCCTCTGCTGCGGAAGCAGGAGCTTTGGTTTGCTTGTGCACAAATCCTGTTTGGGTAGTGAAGACAAGATTGCAGCTTCAGACTCCTCTTCATCAGACACGGCCATACTCTGGGCTATATGATGCATTTAGGACCATAATGAGGGAAGAAGGATTTAGTGCCCTTTACAGGGGGATTGTTCCTGGTTTATTTCTGGTCTCTCATGGTGCTATTCAGTTCACAGCTTACGAAGAGCTTCGTAAAACTATTGTTGATTTGAAGAGCAAAGGAAATGAAACAAAACATCAAAACTCTGATCAACTGTTGAATTCTGTTGATTACGCTGTTCTTGGAGCAACATCAAAAGTTGCTGCAATACTTCTAACCTATCCATTTCAGGTTGTACGGTCTCGTTTGCAGCAACGGCCTAGTGGTGACGGGATACCAAGATATATGGACAGTTGGCATGTTGTGAAAGAAACGGCACGATTTGAAAGGGTCCGAGGATTTTACAAGGGAATCACGCCAAATCTCTTGAAAAACGTTCCTGCTTCTTCAATAACATTTATTGTTTATGAAAATGTTCTAAAATTACTTAAACCGGCTAGAAGGAATGACTGA 945 0.4487 MSTEPPKREQWQWENATAGAAAGFATVAVMHPLDVVRTRFQVNDGRGSHLPSYKNTAHAIFTITRSEGLRGLYAGFLPGVLGSTISWGLYFFFYDKAKQRYARSREEKLSPGLHLASAAEAGALVCLCTNPVWVVKTRLQLQTPLHQTRPYSGLYDAFRTIMREEGFSALYRGIVPGLFLVSHGAIQFTAYEELRKTIVDLKSKGNETKHQNSDQLLNSVDYAVLGATSKVAAILLTYPFQVVRSRLQQRPSGDGIPRYMDSWHVVKETARFERVRGFYKGITPNLLKNVPASSITFIVYENVLKLLKPARRND 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03458 314 Pfam Mitochondrial carrier protein 220 308 IPR018108 -
Tsu04g03458 314 Pfam Mitochondrial carrier protein 11 103 IPR018108 -
Tsu04g03458 314 Pfam Mitochondrial carrier protein 109 199 IPR018108 -
Tsu04g03458 314 Gene3D Mitochondrial carrier domain 100 313 IPR023395 -
Tsu04g03458 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 100 IPR018108 -
Tsu04g03458 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 217 306 IPR018108 -
Tsu04g03458 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 197 IPR018108 -
Tsu04g03458 314 PANTHER BNAA09G07970D PROTEIN 10 308 - -
Tsu04g03458 314 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 10 308 IPR044712 GO:0006862|GO:0055085
Tsu04g03458 314 SUPERFAMILY Mitochondrial carrier 13 302 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03458 Tsu-Chr4 43730448 43737061 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03458 32 307 Chloroplast and Mitochondria Gene Families AT2G47490 38.516 7.84e-49 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03458 K15115 - gmx:100809599 559.681