Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03451 atgGCCAATTTTATGAGCTTTCTCATGCTTCTTTCTTTACTAGCCTTTGCTCCTTCTTGCTTCTGTCACAAGAAATTAGGGTCTTACCTTTATCCACAATTTTATGACTATTCATGTCCACAAGCTCAAGAGATTGTTAAGTCCATCCTTGCCAATGCTGTTGCAAAGGAACCTCGTATAGCTGCTTCACTTTTGAGACTTCATTTTCATGACTGTTTTGTCAAGGGTTGTGATGCTTCAATTTTATTAGATGGCAGTGGAAGCATTATTAGTGAGAAGGTATCAAATCCTAACCGTAATTCAGCTAGAGGATTTGAAGTCATTGATGAAATTAAATCTGCACTAGAGAAACAATGCCCTCATACAGTATCTTGTGCTGATATTTTGGCTATAGCTGCAAGAGACTCGACTGTTCTTGCTGGTGGACCAAACTGGGAAGTGCCTTTAGGCAGAAGGGACTCACTAGGTGCAAGCTTAAGTGGTTCCAACAACAACATTCCAGCTCCAAATAACACATTCCAAACCATCCTAACTAAATTCAAACTTCAAGGACTTGACATTGTTGATCTTGTTGCTCTTTCTGGGAGTCATACTATAGGAAACTCAAGGTGCACAAGCTTTAGGCAAAGACTCTACAACCAAACAGGAAATGGCAAACAAGATTTCACTCTTGATCCATACTACGCTGCTGAATTGCGCGCTAATTGTCCAAAATCCGGTGGTGACCAAAATCTGTTTTTCCTAGACTATGTCACACCAACAAAATTTGATAACAATTACTTCAAGAATCTATTGGCTTACAAGGGATTATTGAGTTCTGATGAAGTTTTGTTGACAAAGAATCAAGAATCAGCTGAGTTGGTGAAGTTGTATGCCGAAAGAAACGATCTTTTCTTTGAGCAATTTGCTAAGTCTATGATCAAGATGGGAAATATTTCTCCTTTGACAGGTTCAAGGGGACATATTAGAACAAATTGCAGGGTGGTTAATTAA 993 0.3877 MANFMSFLMLLSLLAFAPSCFCHKKLGSYLYPQFYDYSCPQAQEIVKSILANAVAKEPRIAASLLRLHFHDCFVKGCDASILLDGSGSIISEKVSNPNRNSARGFEVIDEIKSALEKQCPHTVSCADILAIAARDSTVLAGGPNWEVPLGRRDSLGASLSGSNNNIPAPNNTFQTILTKFKLQGLDIVDLVALSGSHTIGNSRCTSFRQRLYNQTGNGKQDFTLDPYYAAELRANCPKSGGDQNLFFLDYVTPTKFDNNYFKNLLAYKGLLSSDEVLLTKNQESAELVKLYAERNDLFFEQFAKSMIKMGNISPLTGSRGHIRTNCRVVN 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03451 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Tsu04g03451 330 PANTHER PEROXIDASE 72-RELATED 5 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g03451 330 SUPERFAMILY Heme-dependent peroxidases 30 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tsu04g03451 330 ProSiteProfiles Plant heme peroxidase family profile. 29 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g03451 330 PANTHER PEROXIDASE 5 329 - -
Tsu04g03451 330 Gene3D - 34 330 - -
Tsu04g03451 330 Gene3D Peroxidase, domain 2 167 310 - -
Tsu04g03451 330 Pfam Peroxidase 46 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g03451 330 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g03451 330 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g03451 330 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g03451 330 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g03451 330 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g03451 330 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g03451 330 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g03451 330 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g03451 330 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g03451 330 CDD secretory_peroxidase 30 329 IPR033905 GO:0004601|GO:0042744
Tsu04g03451 330 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g03451 330 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g03451 330 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g03451 330 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g03451 330 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g03451 330 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03451 Tsu-Chr4 43706534 43708262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03451 1 330 Peroxidase AT5G66390 75.375 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03451 K00430 - gmx:102667724 552.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03451 04 43706534 43708262 Tsu04g03451 04 43706534 43708262 ECH
Tsu05g00778 05 6568785 6570642 Tsu04g03451 04 43706534 43708262 ECH