Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03445 atgTGGAATCTTTTGAAGGAAGAACTAGTATTTGTAGGGCAAAACTATTATGACATAACCATAGTTTTATTTCTCTCTATAGGATTAACATATTTTGCTTCAAGAGCTTGGAAAAGAGCTACAACAAATAGAGAAGATATCATCCCTGGTAGGCTTGGATTACCTCTTATTGGAGagactttttcttttctttcagcCAATAATAGTACAAGAGGATGCTATGATTTTGTTAGACTTAGAAGATTGTGGCATGGGAGATGGTTCAAAACAAGGCTATTTGGCAAGGTCCACATATTTATTCCAAATCCTGAAGGTGCAAAGACAATATTTGCTAATGACTTTGATCTATTCAACAAAGGTTATGTAAAATCAATGGCAGATGCTGTGGGAAAGAAAAGCTTATTATGTGTACCTGTTGAGAGCCACAAAAGAATAAGGCGTCTTCTATCTGAACCATTCTCCATGACTTCTCTATCTGCATTTAtcaccaagtttgacaaatTGTTGTGTGGAAGGCTTCAAATACTAGAAGATAGTGGGAAGAGTTTCAAGGTGTTGGACTTCTGCATGAAGATGACATTTGATGCAATGTGTGGTATGCTGATGAGCATCACGGAGGATTCATTACTACGACAGATCGAGAAAGATTGCACTGCTGTCTCTGATGCCATGTTGTCTTTCCCAGTCATGATTCCTGGAACCAGATACTACAAAGGCATCATGGCTCGTAAAAGGCTCATGGAAACCTTCAGAGAGATCATTGCTAGACGTAGGAGGGGAGAAGAGTCTACAGATGACTTCCTGCAGTCCATGTTGCAGAGAGACTCATTACCAGCCGGTGAAAAGCTTGATGACTCAGAGATTATGGATAATCTTTTGACATTGATAATTGCTGGACAGACTACTACAGCAGCAGCAATGATGTGGAGTGTAAAATTTCTACATGACAGCAGAGATGCACAGGATATACTCAGGGAAGAACAATTGTCTTTAACCAAAATGAAGCCAGAAGGAGCTTCACTTAATCAGGAAGATATCAACAACATGCGTTATGGTTTGAAGGTAGTTAAGGAAACACTGAGAATGTCTAATGTCCTATTATGGTTTCCTCGCGTTGCACTTAACGACTGTACAATTGAAGGGTATGAAATAAAGAAAGGTTGGCACGTTAACATCGATGCAACTTGTATACATTACGACTCAGATCTTTTCATTGATCCATTGAAATTTAACCCACAAAGATTTGATGAAATGCAAAAGCCCTACAGTTTCATACCTTTTGGATCAGGACCTAGGACTTGCCTTGGGATGAATATGGCAAAAGTGACAATGTTGGTCTTTTTACACAGACTAACTAGTGGTTACACGTGGACCCTTGATGATTTAGATACTTGCTTAGAAAATAAGGCACACATACCTAGACTAAGGAGTGGCTGTCCAATAACATTGAAGTCCATAAGCAAGAGCATGCCAGAGGCATAA 1482 0.3826 MWNLLKEELVFVGQNYYDITIVLFLSIGLTYFASRAWKRATTNREDIIPGRLGLPLIGETFSFLSANNSTRGCYDFVRLRRLWHGRWFKTRLFGKVHIFIPNPEGAKTIFANDFDLFNKGYVKSMADAVGKKSLLCVPVESHKRIRRLLSEPFSMTSLSAFITKFDKLLCGRLQILEDSGKSFKVLDFCMKMTFDAMCGMLMSITEDSLLRQIEKDCTAVSDAMLSFPVMIPGTRYYKGIMARKRLMETFREIIARRRRGEESTDDFLQSMLQRDSLPAGEKLDDSEIMDNLLTLIIAGQTTTAAAMMWSVKFLHDSRDAQDILREEQLSLTKMKPEGASLNQEDINNMRYGLKVVKETLRMSNVLLWFPRVALNDCTIEGYEIKKGWHVNIDATCIHYDSDLFIDPLKFNPQRFDEMQKPYSFIPFGSGPRTCLGMNMAKVTMLVFLHRLTSGYTWTLDDLDTCLENKAHIPRLRSGCPITLKSISKSMPEA 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03445 493 SUPERFAMILY Cytochrome P450 46 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03445 493 Pfam Cytochrome P450 53 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03445 493 PANTHER CYTOCHROME P450 26 20 486 - -
Tsu04g03445 493 PANTHER CYTOCHROME P450 FAMILY PROTEIN 20 486 - -
Tsu04g03445 493 PRINTS P450 superfamily signature 434 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03445 493 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03445 493 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03445 493 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03445 493 Gene3D Cytochrome P450 37 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03445 493 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03445 493 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03445 493 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03445 493 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03445 493 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03445 Tsu-Chr4 43653135 43658017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03445 49 458 Cytochrome P450 AT1G19630 45.542 7.38e-124 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03445 - - gmx:100789430 863.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03445 04 43653135 43658017 Tsu04g03445 04 43653135 43658017 ECH