Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03414 ATGAGATTCGGAGGAGCTCTTCGGAATATTTTACGCCCTTTCTCACTCTCACCATCAAGGATTACCGTAACTTCACAAATCTCATCTACATTGCCATTTCATGGTTCTTTGCCATCTGCCTGCAAACCACCTCAGTTCCTTCTTCCCTTTTTGAACCACTTTCACAGCTTGACAGATACTCGTTTTCCCAAGAGACGACCCTCTGATAAACCTCGTCGAAAGCGGGCTAGCTTGAGACCCTCTGGGCCTTATGCTTGGGTTCAACACACAACTGGTGAGACCATACTTCCCAATAAGCCTAATGAAGGGAGCATCAAGAGAAGAAATGAGAAGAAACGCATGAGGCAGCGCCGTGCCTTTATACTGtcggaaaagaagaaaaggaaagctCAAATGCAAGAAGCTAAGCGGAGGAAAAGCATTAAGAAGGTAGAGCGTAAAATGGCTGCAGTTGCAAGGGAAAGAGCATGGGCAGAAAGACTGGTTGAATTGCAGCGCCTtgaggaagagaagaaaaaAGAAAGCAAACAATGTTGGACTGCCGCTGGGTTAAATGGTTTAATAGAGCCAAGGGTCCAAAACTTTAGTAACGCAGCTGCAGTAATTCTCGATATATGCAGTAGTGAAGATAAGATAGCGGCAGGTCGATGTGCAGTCATGATCTGGGTATTATGGAACAATAGGAACAGCTGGTTGTGGgacaatcaaaagaaaaatgcaGTTCACTTAGGTATGCAAGCCTCTCAAGTTTGGAGTGAATGGTCCATAGCTAATGAAGCTCCTGCGCAACAACAACATAACCAAACGCAGCAGCAACAAACTTGGCAACCACCAAGTTTTGGAACAACATGGGATATTGGAACTTATTCCATTAATGAAGCTGAAGCACTAGCTTTGGTGGAGGCCATTCAAGTTGCTATTAACAGGAATATGGAGCAAATAATCTTTGAAAGTGACTCACAAAATGTAGTGAATGCAGGTCGGTACCGGCTTGCTAGAAATGACGATGTTACTCAGCTCACTTCTGCATCATCATCTTTTACTGCTGGAAACAGATTGGTCCTGCAATTACTACTTGTTCTACTAATTGCTGAACCAGAAATCATTCTTGCATCCATAGTTTTCATAATCATTCATTCCTTGAGATCCAAGAAACATCATAGCCTACCCAATTGGCCTATCATTGGAATGCTTGGAGGACTTAAAACCAACTTATATGAAGGGATAACCGATATacttaaaaatcaaaatggAACATTTAGATTCACAGGGCCATGGTTCACTAGTTTCAATTTCATCATAACCTCAAAACCTCACAATTTAGAACATCTTCTCAAAACAAAGTTCACTAATTTCCCTAAAGGAATCTATTTCAGAGAAACAGTTTCTGATTTACTTGGAGATGGTATTTTTGCTGCAGATAATGAAACATGGCAGAAACAAAGGAAAGCAGCGAGTCTCGAGCTTCATTCAACAAAGTTTAGGAAATCAACAAATGATTCGTTGTTTGAGCTTGTGAACAATAGGCTCATACCTGTATTAGATTCATCTTTGAAGAAATCGATTTCAATCGATCTTCAAGATATTTTGTTGAGACTAACATTTGATAATGTTTGTATGATAGCTTTTGATGTTGATCCTGGTTGTTTGCAACTTCATTTACCTGAAATACCCTTTGCAGCAGCTTTTGAAGATGCATCAGAAGCAACTTTTCTTCGATTTGTCACACCGGCTTGCATATGGAAGGCTATGAGGTTTGTTAACTTAGGTATGGAGAGAAAGTTGAAGGAATCAATACAAAAAGTTGATGAATTTGCTGAGAATGTTATAAGGGCAAGAAGGAAGGATATTTCTTTGGAACATGATATCGATGATGATGATAACCGAAAATCGGATTTGTTAACTGTGTTTATGAGGCTTAAAGATGAGAATGGAAAGACTTATTCAGATAAGTTCTTGAGGGATATAtgtgtaaattttatattagcTGGGAGAGACACTTCTGCAGTTGCTTTGAGTtggtttttttggttgattgatCAGAATCATGAAGTGGAGGAGAAAATAGTAGAAGAGATTTGCAGGGTTGTGAATCAGAGGGAGGATATTCATAAAGAAGTGTTCAATGATTCTTTGAGATTTAGGCCTGAGGAGATAAAGAAGATGGATTATTTGCATGCTGCCCTTTCAGAAGCTCTTAGATTGTATCCATCTGTGCCTATGGATCATAAGGAGgtGGTGGAAGATGACACATTCCCAGAtggaacaaaactaaaaaaaggaacaaaagtgATATATGCAATTTATTCAATGGGAAGAATGGAAAGCATATGGGGAAAAGATTGCTTGGAGTTCAAGCCAGAAAGATGGCTAACTAAAGATGGTCATTTCATGAGTCAATCTGCCTACAGATTCACTGCATTCAATGGAGGACCTAGATTGTGTTTAGGCAAAGATTTTGCATATTACCAAATGAAATACGTTGCAGCCAGCATTGTCTTTCGTTACCATGTTAAGGTTGTTGAGAATCACCCTGTTGTTCCGAAGCTTTCTTTGACGCTTTACATGAAGCATGGATTGAAAGTTAATCTTCATAGGCGTTGTGATGAAGAAATTTGTAAATATTTCTAG 2631 0.3763 MRFGGALRNILRPFSLSPSRITVTSQISSTLPFHGSLPSACKPPQFLLPFLNHFHSLTDTRFPKRRPSDKPRRKRASLRPSGPYAWVQHTTGETILPNKPNEGSIKRRNEKKRMRQRRAFILSEKKKRKAQMQEAKRRKSIKKVERKMAAVARERAWAERLVELQRLEEEKKKESKQCWTAAGLNGLIEPRVQNFSNAAAVILDICSSEDKIAAGRCAVMIWVLWNNRNSWLWDNQKKNAVHLGMQASQVWSEWSIANEAPAQQQHNQTQQQQTWQPPSFGTTWDIGTYSINEAEALALVEAIQVAINRNMEQIIFESDSQNVVNAGRYRLARNDDVTQLTSASSSFTAGNRLVLQLLLVLLIAEPEIILASIVFIIIHSLRSKKHHSLPNWPIIGMLGGLKTNLYEGITDILKNQNGTFRFTGPWFTSFNFIITSKPHNLEHLLKTKFTNFPKGIYFRETVSDLLGDGIFAADNETWQKQRKAASLELHSTKFRKSTNDSLFELVNNRLIPVLDSSLKKSISIDLQDILLRLTFDNVCMIAFDVDPGCLQLHLPEIPFAAAFEDASEATFLRFVTPACIWKAMRFVNLGMERKLKESIQKVDEFAENVIRARRKDISLEHDIDDDDNRKSDLLTVFMRLKDENGKTYSDKFLRDICVNFILAGRDTSAVALSWFFWLIDQNHEVEEKIVEEICRVVNQREDIHKEVFNDSLRFRPEEIKKMDYLHAALSEALRLYPSVPMDHKEVVEDDTFPDGTKLKKGTKVIYAIYSMGRMESIWGKDCLEFKPERWLTKDGHFMSQSAYRFTAFNGGPRLCLGKDFAYYQMKYVAASIVFRYHVKVVENHPVVPKLSLTLYMKHGLKVNLHRRCDEEICKYF 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03414 876 CDD RNase_H_like 280 326 IPR044730 -
Tsu04g03414 876 Pfam Cytochrome P450 390 852 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03414 876 PRINTS P450 superfamily signature 815 826 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03414 876 PRINTS P450 superfamily signature 663 680 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03414 876 PRINTS P450 superfamily signature 806 815 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03414 876 PRINTS P450 superfamily signature 727 738 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03414 876 Gene3D Cytochrome P450 377 872 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03414 876 SUPERFAMILY Cytochrome P450 390 867 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03414 876 PANTHER CYTOCHROME P450 86B1-LIKE 361 869 - -
Tsu04g03414 876 PRINTS E-class P450 group I signature 672 698 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03414 876 PRINTS E-class P450 group I signature 805 815 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03414 876 PRINTS E-class P450 group I signature 652 669 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03414 876 PRINTS E-class P450 group I signature 815 838 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03414 876 PRINTS E-class P450 group I signature 726 744 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03414 876 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 808 817 IPR017972 GO:0005506|GO:0016705
Tsu04g03414 876 SUPERFAMILY Ribonuclease H-like 284 336 IPR012337 -
Tsu04g03414 876 Gene3D - 225 351 IPR036397 GO:0003676
Tsu04g03414 876 Pfam Reverse transcriptase-like 287 331 IPR002156 GO:0003676|GO:0004523
Tsu04g03414 876 MobiDBLite consensus disorder prediction 60 115 - -
Tsu04g03414 876 PANTHER CYTOCHROME P450 361 869 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03414 Tsu-Chr4 43368200 43375003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03414 367 876 Cytochrome P450 AT5G23190 66.214 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03414 K15402 - gmx:100809503 795.038